selected publications
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journal article
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Estimation of spatial demographic maps from polymorphism data using a neural network.
Molecular Ecology Resources.
2024
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Gene expression and alternative splicing contribute to adaptive divergence of ecotypes.
Heredity.
120-132.
2024
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disperseNN2: a neural network for estimating dispersal distance from georeferenced polymorphism data.
BMC Bioinformatics.
2023
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Machine learning speeds up genetic structure analysis.
Nature Computational Science.
580-581.
2023
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Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
eLife.
2023
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Dispersal inference from population genetic variation using a convolutional neural network.
Genetics: a periodical record of investigations bearing on heredity and variation.
2023
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A migratory divide spanning two continents is associated with genomic and ecological divergence.
Evolution.
722-736.
2022
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Aberrant RNA splicing due to genetic incompatibilities in sunflower hybrids.
Evolution.
2747-2758.
2021
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Sex-linked genetic diversity and differentiation in a globally distributed avian species complex.
Molecular Ecology.
2313-2332.
2021
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The gut microbiota response to helminth infection depends on host sex and genotype.
The ISME Journal: multidisciplinary journal of microbial ecology.
1141-1153.
2020
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Migratory divides coincide with reproductive barriers across replicated avian hybrid zones above the Tibetan Plateau.
Ecology Letters.
231-241.
2020
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Leveraging whole genome sequencing data for demographic inference with approximate Bayesian computation.
Molecular Ecology Resources.
125-139.
2020
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Unifying Theoretical and Empirical Perspectives on Genomic Differentiation.
Trends in Ecology and Evolution.
987-995.
2019
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Book Review: Molecular Population Genetics. Matthew Hahn..
Molecular Ecology.
2018
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Demographic inference in barn swallows using whole-genome data shows signal for bottleneck and subspecies differentiation during the Holocene.
Molecular Ecology.
4200-4212.
2018
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Genetics of alternative splicing evolution during sunflower domestication.
Proceedings of the National Academy of Sciences of USA.
6768-6773.
2018
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Effects of assortative mate choice on the genomic and morphological structure of a hybrid zone between two bird subspecies.
Molecular Ecology.
6430-6444.
2017
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Dietary input of microbes and host genetic variation shape among-population differences in stickleback gut microbiota.
The ISME Journal: multidisciplinary journal of microbial ecology.
2515-2526.
2015
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Wolbachia do not live by reproductive manipulation alone: infection polymorphism in Drosophila suzukii and D. subpulchrella.
Molecular Ecology.
4871-4885.
2014
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Estimation of spatial demographic maps from polymorphism data using a neural network.
Molecular Ecology Resources.
2024