The ISME Journal: multidisciplinary journal of microbial ecology Journal

Overview

publication venue for

Leveraging genomic information to predict environmental preferences of bacteria 2024
Ecological relevance of flagellar motility in soil bacterial communities 2024
Microbial drivers of methane emissions from unrestored industrial salt ponds 2022
Variable influences of soil and seed-associated bacterial communities on the assembly of seedling microbiomes 2021
Diversification of methanogens into hyperalkaline serpentinizing environments through adaptations to minimize oxidant limitation 2021
Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community 2020
Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow 2020
A phylogenetic model for the recruitment of species into microbial communities and application to studies of the human microbiome 2020
Oxygen isotope effects during microbial sulfate reduction: applications to sediment cell abundances 2020
The gut microbiota response to helminth infection depends on host sex and genotype 2020
Biodiversity of protists and nematodes in the wild nonhuman primate gut 2020
Unlinked rRNA genes are widespread among bacteria and archaea 2020
High proportions of bacteria and archaea across most biomes remain uncultured 2019
Physiological adaptations to serpentinization in the Samail Ophiolite, Oman 2019
Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network 2019
Microbial residence time is a controlling parameter of the taxonomic composition and functional profile of microbial communities 2019
Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes 2019
Linking bacterial community composition to soil salinity along environmental gradients 2019
The ecology and diversity of microbial eukaryotes in geothermal springs 2018
Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession 2018
Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits 2018
Electron carriers in microbial sulfate reduction inferred from experimental and environmental sulfur isotope fractionations 2018
dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication 2017
Decreases in average bacterial community rRNA operon copy number during succession 2016
Inhibitory bacteria reduce fungi on early life stages of endangered Colorado boreal toads (Anaxyrus boreas) 2016
Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp 2016
Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp (vol 10, pg 514, 2016) 2016
Molecular mechanisms underlying the close association between soil Burkholderia and fungi 2016
Dietary input of microbes and host genetic variation shape among-population differences in stickleback gut microbiota 2015
Primate vaginal microbiomes exhibit species specificity without universal Lactobacillus dominance 2014
Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus) 2014
Using network analysis to explore co-occurrence patterns in soil microbial communities (vol 6, pg 343, 2012) 2014
A meta-analysis of changes in bacterial and archaeal communities with time 2013
Temporal variability in soil microbial communities across land-use types 2013
Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes 2013
Changes in assembly processes in soil bacterial communities following a wildfire disturbance 2013
Global biogeography of highly diverse protistan communities in soil 2013
Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat 2013
Lake microbial communities are resilient after a whole-ecosystem disturbance 2012
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms 2012
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients 2012
Co-habiting amphibian species harbor unique skin bacterial communities in wild populations 2012
Using network analysis to explore co-occurrence patterns in soil microbial communities 2012
Examining the global distribution of dominant archaeal populations in soil 2011
Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments 2011
UniFrac: an effective distance metric for microbial community comparison 2011
Soil bacterial and fungal communities across a pH gradient in an arable soil 2010
Bacterial communities of disease vectors sampled across time, space, and species 2010
A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses 2009

Research

keywords

06 Biological Sciences, 10 Technology, 05 Environmental Sciences