publication venue for

• Microbial ecology of serpentinite-hosted ecosystems 2025
• High strain-level diversity of Bradyrhizobium across Australian soils. 2025
• Microbial cross-feeding stabilized by segregation of a dependent mutant from its independent ancestor 2025
• Leveraging genomic information to predict environmental preferences of bacteria 2024
• Ecological relevance of flagellar motility in soil bacterial communities 2024
• Microbial drivers of methane emissions from unrestored industrial salt ponds 2022
• Variable influences of soil and seed-associated bacterial communities on the assembly of seedling microbiomes 2021
• Diversification of methanogens into hyperalkaline serpentinizing environments through adaptations to minimize oxidant limitation 2021
• Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community 2020
• Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow 2020
• A phylogenetic model for the recruitment of species into microbial communities and application to studies of the human microbiome 2020
• Oxygen isotope effects during microbial sulfate reduction: applications to sediment cell abundances 2020
• Biodiversity of protists and nematodes in the wild nonhuman primate gut 2020
• Unlinked rRNA genes are widespread among bacteria and archaea 2020
• High proportions of bacteria and archaea across most biomes remain uncultured 2019
• Physiological adaptations to serpentinization in the Samail Ophiolite, Oman 2019
• Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network 2019
• Microbial residence time is a controlling parameter of the taxonomic composition and functional profile of microbial communities 2019
• Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes 2019
• Linking bacterial community composition to soil salinity along environmental gradients 2019
• The ecology and diversity of microbial eukaryotes in geothermal springs 2018
• Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession 2018
• Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits 2018
• Electron carriers in microbial sulfate reduction inferred from experimental and environmental sulfur isotope fractionations 2018
• dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication 2017
• Decreases in average bacterial community rRNA operon copy number during succession 2016
• Inhibitory bacteria reduce fungi on early life stages of endangered Colorado boreal toads (Anaxyrus boreas) 2016
• Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp 2016
• Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp (vol 10, pg 514, 2016) 2016
• Molecular mechanisms underlying the close association between soil Burkholderia and fungi 2016
• Primate vaginal microbiomes exhibit species specificity without universal Lactobacillus dominance 2014
• Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus) 2014
• Using network analysis to explore co-occurrence patterns in soil microbial communities (vol 6, pg 343, 2012) 2014
• A meta-analysis of changes in bacterial and archaeal communities with time 2013
• Temporal variability in soil microbial communities across land-use types 2013
• Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes 2013
• Changes in assembly processes in soil bacterial communities following a wildfire disturbance 2013
• Global biogeography of highly diverse protistan communities in soil 2013
• Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat 2013
• Lake microbial communities are resilient after a whole-ecosystem disturbance 2012
• Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms 2012
• Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients 2012
• Co-habiting amphibian species harbor unique skin bacterial communities in wild populations 2012
• Using network analysis to explore co-occurrence patterns in soil microbial communities 2012
• Examining the global distribution of dominant archaeal populations in soil 2011
• Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments 2011
• UniFrac: an effective distance metric for microbial community comparison 2011
• Soil bacterial and fungal communities across a pH gradient in an arable soil 2010
• Bacterial communities of disease vectors sampled across time, space, and species 2010
• A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses 2009