publication venue for
- Experimental Data Connector (XDC): Integrating the Capture of Experimental Data and Metadata Using Standard Formats and Digital Repositories 2023
- SynBioSuite: A Tool for Improving the Workflow for Genetic Design and Modeling 2023
- A Comparison of Weighted Stochastic Simulation Methods for the Analysis of Genetic Circuits 2023
- Excel-SBOL Converter: Creating SBOL from Excel Templates and Vice Versa 2023
- Genetically Encoded Detection of Biosynthetic Protease Inhibitors 2022
- Evolution-Guided Biosynthesis of Terpenoid Inhibitors 2022
- Round Trip: An Automated Pipeline for Experimental Design, Execution, and Analysis 2022
- Sequence-Based Searching for SynBioHub Using VSEARCH 2022
- Analysis of Three Architectures for Controlling PTP1B with Light 2021
- Synthetic Biology Curation Tools (SYNBICT) 2021
- Stochastic Hazard Analysis of Genetic Circuits in iBioSim and STAMINA 2021
- Curation Principles Derived from the Analysis of the SBOL iGEM Data Set 2021
- Synthetic Biology Knowledge System 2021
- VisBOL2-Improving Web-Based Visualization for Synthetic Biology Designs 2021
- SBOLCanvas: A Visual Editor for Genetic Designs 2021
- Microbially Guided Discovery and Biosynthesis of Biologically Active Natural Products 2021
- Engineering Transcriptional Interference through RNA Polymerase Processivity Control 2021
- Transcriptional Regulatory Networks Involved in C3-C4 Alcohol Stress Response and Tolerance in Yeast 2021
- Genetic Circuit Dynamics: Hazard and Glitch Analysis 2020
- Multiplex Evolution of Antibody Fragments Utilizing a Yeast Surface Display Platform 2020
- Determinants for Efficient Editing with Cas9-Mediated Recombineering in Escherichia coli 2020
- Extending SynBioHub's Functionality with Plugins 2020
- SBOL Visual 2 Ontology 2020
- In Vitro Selection of Peptides and Proteins-Advantages of mRNA Display 2020
- Saturation Mutagenesis Genome Engineering of Infective Phi X174 Bacteriophage via Unamplified Oligo Pools and Golden Gate Assembly 2020
- Construction of Two-Input Logic Gates Using Transcriptional Interference 2019
- SBOLExplorer: Data Infrastructure and Data Mining for Genetic Design Repositories 2019
- Communicating Structure and Function in Synthetic Biology Diagrams 2019
- A Computational Workflow for the Automated Generation of Models of Genetic Designs 2019
- SBOL-OWL: An Ontological Approach for Formal and Semantic Representation of Synthetic Biology Information 2019
- Specifying Combinatorial Designs with the Synthetic Biology Open Language (SBOL) 2019
- iBioSim 3: A Tool for Model-Based Genetic Circuit Design 2019
- pySBOL: A Python Package for Genetic Design Automation and Standardization 2019
- An Automated Data-Driven Pipeline for Improving Heterologous Enzyme Expression 2019
- sboljs: Bringing the Synthetic Biology Open Language to the Web Browser 2019
- Genomic Deoxyxylulose Phosphate Reductoisomerase (DXR) Mutations Conferring Resistance to the Antimalarial Drug Fosmidomycin in E. coli 2018
- Genomic Deoxyxylulose Phosphate Reductoisomerase (DXR) Mutations Confering Resistance to the Antimalarial Drug Fosmidomycin in E. coli 2018
- Rational Control of Calcium Carbonate Precipitation by Engineered Escherichia coli 2018
- Spatiotemporal Control of TGF-beta Signaling with Light 2018
- SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology 2018
- A Genetic Toolbox for Modulating the Expression of Heterologous Genes in the Cyanobacterium Synechocystis sp PCC 6803 2018
- A Validator and Converter for the Synthetic Biology Open Language 2017
- SBOLDesigner 2: An Intuitive Tool for Structural Genetic Design 2017
- SBOLme: a Repository of SBOL Parts for Metabolic Engineering 2017
- A Converter from the Systems Biology Markup Language to the Synthetic Biology Open Language 2016
- Sharing Structure and Function in Biological Design with SBOL 2.0 2016
- Comprehensive Sequence-Flux Mapping of a Levoglucosan Utilization Pathway in E. coli 2015
- Proposed Data Model for the Next Version of the Synthetic Biology Open Language 2015
- Engineered Calcium-Precipitable Restriction Enzyme 2014
- Directed Acyclic Graph-Based Technology Mapping of Genetic Circuit Models 2014
- A Methodology to Annotate Systems Biology Markup Language Models with the Synthetic Biology Open Language 2014
- Modularity of Select Riboswitch Expression Platforms Enables Facile Engineering of Novel Genetic Regulatory Devices 2013
- Dynamic Modeling of Cellular Populations within iBioSim 2013
- IWBDA 2012 Special Issue 2013
- Efficient Analysis of Systems Biology Markup Language Models of Cellular Populations Using Arrays 2015
- Generating Systems Biology Markup Language Models from the Synthetic Biology Open Language 2014