GIGGLE: a search engine for large-scale integrated genome analysis. Journal Article uri icon

Overview

abstract

  • GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between query features and thousands of genome interval files. GIGGLE (https://github.com/ryanlayer/giggle) scales to billions of intervals and is over three orders of magnitude faster than existing methods. Its speed extends the accessibility and utility of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data integration and hypothesis generation.

publication date

  • February 1, 2018

Date in CU Experts

  • January 31, 2019 1:05 AM

Full Author List

  • Layer RM; Pedersen BS; DiSera T; Marth GT; Gertz J; Quinlan AR

author count

  • 6

Other Profiles

Electronic International Standard Serial Number (EISSN)

  • 1548-7105

Additional Document Info

start page

  • 123

end page

  • 126

volume

  • 15

issue

  • 2