Nature Methods Journal

Overview

publication venue for

• RNA-Puzzles Round V: blind predictions of 23 RNA structures 2025
• Searching thousands of genomes to classify somatic and novel structural variants using STIX (vol 19, pg 445, 2022) 2022
• Searching thousands of genomes to classify somatic and novel structural variants using STIX 2022
• Three-dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval 2020
• Learning representations of microbe-metabolite interactions. 2019
Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments 2019
Reduced MEK inhibition preserves genomic stability in naive human embryonic stem cells 2018
GIGGLE: a search engine for large-scale integrated genome analysis. 2018
An improved MS2 system for accurate reporting of the mRNA life cycle 2018
Genetically encoded biosensors for visualizing live-cell biochemical activity at super-resolution 2017
Plasmid-based one-pot saturation mutagenesis 2016
A practical guide to hydrogels for cell culture 2016
Efficient genotype compression and analysis of large genetic-variation data sets 2015
Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display 2015
In vivo cell-cycle profiling in xenograft tumors by quantitative intravital microscopy 2015
Rapid, optimized interactomic screening 2015
Small molecules facilitate rapid and synchronous iPSC generation 2014
Predicting microbial distributions in space and time 2012
High-throughput stem-cell niches 2011
Proteomic and phosphoproteomic comparison of human ES and iPS cells 2011
Bayesian community-wide culture-independent microbial source tracking 2011
Microbial community resemblance methods differ in their ability to detect biologically relevant patterns 2010
QIIME allows analysis of high-throughput community sequencing data 2010
Imaging type-III secretion reveals dynamics and spatial segregation of Salmonella effectors 2010
mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts 2008
GFP fails to inhibit actin-myosin interactions in vitro 2008
Mapping protein post-translational modifications with mass spectrometry 2007
ProteomeBinders:: planning a European resource of affinity reagents for analysis of the human proteome 2007
Protein-protein interaction assays: eliminating false positive interactions 2006
Correlative microscopy and electron tomography of GFP through photooxidation 2005
... more

Research

keywords

• 06 Biological Sciences, 10 Technology, 11 Medical and Health Sciences