RNA Polymerase II PubMed MeSh Term

Overview

subject area of

• A Genetic Screen Identifies TCF3/E2A and TRIAP1 as Pathway-Specific Regulators of the Cellular Response to p53 Activation  Journal Article
• A kinetic model for the early steps of RNA synthesis by human RNA polymerase II  Journal Article
• A unified nomenclature for protein subunits of Mediator complexes linking transcriptional regulators to RNA polymerase II  Journal Article
• Acetyl coenzyme A stimulates RNA polymerase II transcription and promoter binding by transcription factor IID in the absence of histones  Journal Article
• Actin is part of pre-initiation complexes and is necessary for transcription by RNA polymerase II  Journal Article
• Activator-Mediator Binding Stabilizes RNA Polymerase II Orientation within the Human Mediator-RNA Polymerase II-TFIIF Assembly  Journal Article
• An 8 nt RNA triggers a rate-limiting shift of RNA polymerase II complexes into elongation  Journal Article
• B2 RNA and Alu RNA repress transcription by disrupting contacts between RNA polymerase II and promoter DNA within assembled complexes  Journal Article
• B2 RNA binds directly to RNA polymerase II to repress transcript synthesis  Journal Article
• B2 RNA represses TFIIH phosphorylation of RNA polymerase II  Journal Article
• Backtracked and paused transcription initiation intermediate of Escherichia coli RNA polymerase  Journal Article
• CDK8 Kinase Phosphorylates Transcription Factor STAT1 to Selectively Regulate the Interferon Response  Journal Article
• CDK8 is a positive regulator of transcriptional elongation within the serum response network.  Journal Article
• CDK8 is a stimulus-specific positive coregulator of p53 target genes  Journal Article
• CDK8: a positive regulator of transcription.  Journal Article
• Characterization of the structure, function, and mechanism of B2 RNA, an ncRNA repressor of RNA polymerase II transcription  Journal Article
• Chemical inhibitors of transcription-associated kinases  Journal Article
• Chromatin signature of embryonic pluripotency is established during genome activation  Journal Article
• Everything at once: cryo-EM yields remarkable insights into human RNA polymerase II transcription  Journal Article
• FUS binds the CTD of RNA polymerase II and regulates its phosphorylation at Ser2  Journal Article
• FUS is sequestered in nuclear aggregates in ALS patient fibroblasts  Journal Article
• Finding the start site: redefining the human initiator element  Journal Article
• Gene-specific repression of the p53 target gene PUMA via intragenic CTCF-Cohesin binding  Journal Article
• Gene-specific requirement for P-TEFb activity and RNA polymerase II phosphorylation within the p53 transcriptional program  Journal Article
• Genes involved in pre-mRNA 3′-end formation and transcription termination revealed by a lin-15 operon Muv suppressor screen  Journal Article
• Genome-wide dose-dependent inhibition of histone deacetylases studies reveal their roles in enhancer remodeling and suppression of oncogenic super-enhancers  Journal Article
• HIF1A Employs CDK8-Mediator to Stimulate RNAPII Elongation in Response to Hypoxia  Journal Article
• Heat Shock Causes a Reversible Increase in RNA Polymerase II Occupancy Downstream of mRNA Genes, Consistent with a Global Loss in Transcriptional Termination  Journal Article
• Histone chaperone FACT action during transcription through chromatin by RNA polymerase II  Journal Article
• How do lncRNAs regulate transcription?  Journal Article
• Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock  Journal Article
• Human CRSP interacts with RNA polymerase IICTD and adopts a specific CTD-bound conformation  Journal Article
• Human TFIIH Kinase CDK7 Regulates Transcription-Associated Chromatin Modifications  Journal Article
• In vitro studies of the early steps of RNA synthesis by human RNA polymerase II  Journal Article
• Infection by Herpes Simplex Virus 1 Causes Near-Complete Loss of RNA Polymerase II Occupancy on the Host Cell Genome  Journal Article
• InvAluable Junk: The Cellular Impact and Function of Alu and B2 RNAs  Journal Article
• Kinetic and mechanistic analysis of the RNA polymerase II transcrption reaction at the human interleukin-2 promoter.  Journal Article
• Lessons from eRNAs: understanding transcriptional regulation through the lens of nascent RNAs  Journal Article
• Lessons on transcriptional control from the serum response network  Journal Article
• Localization of RNAPII and 3 ' end formation factor CstF subunits on C. elegans genes and operons  Journal Article
• Mediator and post-recruitment regulation of RNA polymerase II.  Journal Article
• Molecular Architecture of the Human Mediator-RNA Polymerase II-TFIIF Assembly  Journal Article
• Monitoring transcriptional activity by RNA polymerase II in vitro using single molecule co-localization  Journal Article
• New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes  Journal Article
• Non-coding-RNA regulators of RNA polymerase II transcription  Journal Article
• Noncoding RNAs: Regulators of the Mammalian Transcription Machinery  Journal Article
• Nuclear myosin I is necessary for the formation of the first phosphodiester bond during transcription initiation by RNA polymerase II  Journal Article
• ORGANIZATION AND EXPRESSION OF NON-ALU FAMILY INTERSPERSED REPETITIVE DNA-SEQUENCES IN THE MOUSE GENOME  Journal Article
• PHOSPHORYLATION OF THE C-TERMINAL DOMAIN OF RNA-POLYMERASE-II BY THE EXTRACELLULAR-SIGNAL-REGULATED PROTEIN-KINASE ERK2  Journal Article
• Picking a nucleosome lock: Sequence- and structure-specific recognition of the nucleosome  Journal Article
• Pol II phosphorylation regulates a switch between transcriptional and splicing condensates  Journal Article
• Promoter escape limits the rate of RNA polymerase II transcription and is enhanced by TFIIE, TFIIH, and ATP on negatively supercoiled DNA  Journal Article
• RNA Pol II transcription model and interpretation of GRO-seq data  Journal Article
• RNA Polymerase II C-Terminal Domain Phosphorylation Patterns in Caenorhabditis elegans Operons, Polycistronic Gene Clusters with Only One Promoter  Journal Article
• RNA Polymerase II and TAFs Undergo a Slow Isomerization after the Polymerase Is Recruited to Promoter-Bound TFIID  Journal Article
• RNA Seeds Higher-Order Assembly of FUS Protein  Journal Article
• RNA polymerase II acts as an RNA-dependent RNA polymerase to extend and destabilize a non-coding RNA  Journal Article
• RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes  Journal Article
• Rapid P-TEFb-dependent transcriptional reorganization underpins the glioma adaptive response to radiotherapy  Journal Article
• Release of Human TFIIB from Actively Transcribing Complexes Is Triggered upon Synthesis of 7-and 9-nt RNAs  Journal Article
• Repetitive element transcripts are elevated in the brain of C9orf72 ALS/FTLD patients  Journal Article
• SEQUENCE ORGANIZATION OF VARIANT MOUSE 4.5 S-RNA GENES AND PSEUDOGENES  Journal Article
• Single molecule microscopy reveals mechanistic insight into RNA polymerase II preinitiation complex assembly and transcriptional activity  Journal Article
• Single molecule microscopy to profile the effect of zinc status on transcription factor dynamics  Journal Article
• Single molecule studies of RNA polymerase II transcription in vitro.  Journal Article
• Structural Insights into Transcriptional Repression by Noncoding RNAs That Bind to Human Pol II  Journal Article
• Structural visualization of key steps in human transcription initiation  Journal Article
• Structure and mechanism of the RNA polymerase II transcription machinery  Journal Article
• Studying the Affinity, Kinetic Stability, and Specificity of RNA/Protein Interactions: SINE ncRNA/Pol II Complexes as a Model System  Journal Article
• TATA-binding Protein and Transcription Factor IIB Induce Transcript Slipping during Early Transcription by RNA Polymerase II  Journal Article
• TFIID Enables RNA Polymerase II Promoter-Proximal Pausing  Journal Article
• TFIIF Facilitates Dissociation of RNA Polymerase II from Noncoding RNAs That Lack a Repression Domain  Journal Article
• TRANSCRIPTIONAL MEASUREMENTS OF MOUSE REPEATED DNA-SEQUENCES  Journal Article
• TRIM28 regulates RNA polymerase II promoter-proximal pausing and pause release  Journal Article
• Techniques to analyze the HIV-1 Tat and TAR RNA-dependent recruitment and activation of the cyclin T1 : CDK9 (P-TEFb) transcription elongation factor  Book
• The Herpes Simplex Virus 1 Protein ICP4 Acts as both an Activator and a Repressor of Host Genome Transcription during Infection  Journal Article
• The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling  Journal Article
• The Mediator complex and transcription regulation  Journal Article
• The Mediator complex as a master regulator of transcription by RNA polymerase II  Journal Article
• The Mediator kinase module: an interface between cell signaling and transcription  Journal Article
• The Non-Coding B2 RNA Binds to the DNA Cleft and Active-Site Region of RNA Polymerase II  Journal Article
• The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock  Journal Article
• The elongation factor Spn1 is a multi-functional chromatin binding protein  Journal Article
• The essential and multifunctional TFIIH complex  Journal Article
• The regulation of mammalian mRNA transcription by lncRNAs: recent discoveries and current concepts  Journal Article
• The sequence at specific positions in the early transcribed region sets the rate of transcript synthesis by RNA polymerase II in vitro  Journal Article
• Torque modulates nucleosome stability and facilitates H2A/H2B dimer loss  Journal Article
• Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH: a model for promoter clearance.  Journal Article
• Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II.  Journal Article
• Transcriptional Responses to IFN-γ Require Mediator Kinase-Dependent Pause Release and Mechanistically Distinct CDK8 and CDK19 Functions  Journal Article
• Transcriptional regulation by hypoxia inducible factors  Journal Article
• Transcriptional regulation: It takes a village  Journal Article
• Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape  Journal Article
• Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation  Journal Article
• XPB, a subunit of TFIIH, is a target of the natural product triptolide  Journal Article
• c-Jun binds the N terminus of human TAF(II)250 to derepress RNA polymerase II transcription in vitro  Journal Article
• p53 activates transcription by directing structural shifts in Mediator  Journal Article

broader concept

• DNA-Directed RNA Polymerases  PubMed MeSh Term