Nucleoproteins - RNA-Binding Proteins PubMed MeSh Term

Overview

subject area of

• 'Oming in on RNA-protein interactions  Journal Article
• A SPECIFIC, UV-INDUCED RNA PROTEIN CROSS-LINK USING 5-BROMOURIDINE-SUBSTITUTED RNA  Journal Article
• A coat for all sequences  Journal Article
• A novel family of C. elegans snRNPs contains proteins associated with trans-splicing  Journal Article
• A role for a rat homolog of staufen in the transport of RNA to neuronal dendrites  Journal Article
• A specific RNA structural motif mediates high affinity binding by the HIV-1 nucleocapsid protein (NCp7)  Journal Article
• A thermodynamic analysis of the sequence-specific binding of RNA by bacteriophage MS2 coat protein  Journal Article
• AN RNA-PROTEIN CONTACT DETERMINED BY 5-BROMOURIDINE SUBSTITUTION, PHOTO-CROSS-LINKING AND SEQUENCING  Journal Article
• Absence of mutations in DICE1/DDX26 gene in human cancer cell lines with frequent 13q14 deletions  Journal Article
• Activating RNAs associate with Mediator to enhance chromatin architecture and transcription  Journal Article
• Alanine scanning of MS2 coat protein reveals protein-phosphate contacts involved in thermodynamic hot spots.  Journal Article
• An uncapped RNA suggests a model for Caenorhabditis elegans polycistronic pre-mRNA processing.  Journal Article
• Arginine methylation promotes translation repression activity of eIF4G-binding protein, Scd6  Journal Article
• BACTERIOPHAGE-T4 REGA PROTEIN BINDS TO MESSENGER-RNAS AND PREVENTS TRANSLATION INITIATION  Journal Article
• Biochemical Properties and Biological Functions of FET Proteins  Journal Article
• Bioinformatics Analysis to Identify RNA-Protein Interactions in Oogenesis.  Journal Article
• Building specificity with nonspecific RNA-binding proteins  Journal Article
• CRYSTAL-STRUCTURE OF THE T4 REGA TRANSLATIONAL REGULATOR PROTEIN AT 1.9-ANGSTROM RESOLUTION  Journal Article
• Cloning and biochemical characterization of Bacillus subtilis YxiN, a DEAD protein specifically activated by 23S rRNA: delineation of a novel sub-family of bacterial DEAD proteins  Journal Article
• Comparative Haploid Genetic Screens Reveal Divergent Pathways in the Biogenesis and Trafficking of Glycophosphatidylinositol-Anchored Proteins  Journal Article
• Configurational Preferences of Arylamide alpha-Helix Mimetics via Alchemical Free Energy Calculations of Relative Binding Affinities  Journal Article
• Control of somatic tissue differentiation by the long non-coding RNA TINCR  Journal Article
• Cooperative binding of ATP and RNA substrates to the DEAD/H protein DbpA  Journal Article
• Coupled Caspase and N-End Rule Ligase Activities Allow Recognition and Degradation of Pluripotency Factor LIN-28 during Non-Apoptotic Development  Journal Article
• Crystal structure of the essential N-terminal domain of telomerase reverse transcriptase  Journal Article
• DGCR8-dependent microRNA biogenesis is essential for skin development  Journal Article
• DNMT1-interacting RNAs block gene-specific DNA methylation  Journal Article
• Differential recognition of the polypyrimidine-tract by the general splicing factor U2AF(65) and the splicing repressor sex-lethal  Journal Article
• Distinct regulatory programs establish widespread sex-specific alternative splicing in Drosophila melanogaster  Journal Article
• Drosophila ATR in double-strand break repair  Journal Article
• Drosophila sex-lethal protein mediates polyadenylation switching in the female germline  Journal Article
• EFFICIENT PROTEIN-FACILITATED SPLICING OF THE YEAST MITOCHONDRIAL BI5 INTRON  Journal Article
• Emerging Roles for Intermolecular RNA-RNA Interactions in RNP Assemblies  Journal Article
• Enhancer elements activate the weak 3' splice site of alpha-tropomyosin exon 2.  Journal Article
• Escherichia coli DbpA is a 3' --> 5' RNA helicase.  Journal Article
• Escherichia coli DbpA is an RNA helicase that requires hairpin 92 of 23S rRNA  Journal Article
• Essential regions of Saccharomyces cerevisiae telomerase RNA: separate elements for Est1p and Est2p interaction.  Journal Article
• Evaluation of methylphosphonates as analogs for detecting phosphate contacts in RNA-protein complexes  Journal Article
• Expanded encyclopaedias of DNA elements in the human and mouse genomes  Journal Article
• Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins  Journal Article
• FASTKD1 and FASTKD4 have opposite effects on expression of specific mitochondrial RNAs, depending upon their endonuclease-like RAP domain  Journal Article
• Fast-Find: A novel computational approach to analyzing combinatorial motifs  Journal Article
• Feed-Forward Regulation of a Cell Fate Determinant by an RNA-Binding Protein Generates Asymmetry in Yeast  Journal Article
• Functional redundancy of worm splicelosomal proteins U1A and U2B"  Journal Article
• GW182 family proteins are crucial for microRNA-mediated gene silencing  Journal Article
• Genes involved in pre-mRNA 3 '-end formation and transcription termination revealed by a lin-15 operon Muv suppressor screen  Journal Article
• Genome-Wide Identification of Alternatively Spliced mRNA Targets of Specific RNA-Binding Proteins  Journal Article
• Genome-wide analysis of Musashi-2 targets reveals novel functions in governing epithelial cell migration  Journal Article
• Genome-wide screening for DNA variants associated with reading and language traits  Journal Article
• Global analysis of yeast mRNPs  Journal Article
• Heat shock in C. elegans induces downstream of gene transcription and accumulation of double-stranded RNA  Journal Article
• High yield photocrosslinking of a 5-iodocytidine (IC) substituted RNA to its associated protein  Journal Article
• Human Pumilio Proteins Recruit Multiple Deadenylases to Efficiently Repress Messenger RNAs  Journal Article
• Identification and analysis of the interaction between Edc3 and Dcp2 in Saccharomyces cerevisiae.  Journal Article
• Identification of Endogenous mRNA-Binding Proteins in Yeast Using Crosslinking and PolyA Enrichment  Journal Article
• Identification of G2/M targets for the MAP kinase pathway by functional proteomics  Journal Article
• Identification of proteins binding coding and non-coding human RNAs using protein microarrays  Journal Article
• Impaired response to exercise intervention in the vasculature in metabolic syndrome  Journal Article
• In vitro selection of a novel catalytic RNA: Characterization of a sulfur alkylation reaction and interaction with a small peptide  Journal Article
• In vivo cross-linking followed by polyA enrichment to identify yeast mRNA binding proteins.  Journal Article
• Interaction of Escherichia coli DbpA with 23S rRNA in different functional states of the enzyme.  Journal Article
• Interaction of R17 coat protein with its RNA binding site for translational repression.  Journal Article
• Interaction of R17 coat protein with synthetic variants of its ribonucleic acid binding site.  Journal Article
• Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX  Journal Article
• Intrinsically Disordered Regions Can Contribute Promiscuous Interactions to RNP Granule Assembly  Journal Article
• Isolation of yeast and mammalian stress granule cores  Journal Article
• Kinetic analysis of the RNA-dependent adenosinetriphosphatase activity of DbpA, an Escherichia coli DEAD protein specific for 23S ribosomal RNA  Journal Article
• Kinetic and thermodynamic characterization of the R17 coat protein-ribonucleic acid interaction.  Journal Article
• Lin28 promotes the proliferative capacity of neural progenitor cells in brain development  Journal Article
• Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies  Journal Article
• Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation  Journal Article
• MUTANTS OF THE BACTERIOPHAGE-MS2 COAT PROTEIN THAT ALTER ITS COOPERATIVE BINDING TO RNA  Journal Article
• Mago Nashi and Tsunagi/Y14, respectively, regulate Drosophila germline stem cell differentiation and oocyte specification  Journal Article
• Mago Nashi, Tsunagi/Y14, and Ranshi form a complex that influences oocyte differentiation in Drosophila melanogaster  Journal Article
• Mitochondrial RNA granules are fluid condensates positioned by membrane dynamics  Journal Article
• Modifying the specificity of an RNA backbone contact  Journal Article
• Modular regulatory principles of large non-coding RNAs  Journal Article
• Mutagenesis of a stacking contact in the MS2 coat protein-RNA complex  Journal Article
• Nucleoprotein photo-cross-linking using halopyrimidine-substituted RNAs  Journal Article
• Nucleoside and nucleotide inactivation of R17 coat protein: evidence for a transient covalent RNA-protein bond.  Journal Article
• Numerous interactions act redundantly to assemble a tunable size of P bodies in Saccharomyces cerevisiae  Journal Article
• PAR-TERRA is the main contributor to telomeric repeat-containing RNA transcripts in normal and cancer mouse cells.  Journal Article
• PHOTO-CROSS-LINKING OF 5-IODOURACIL SUBSTITUTED RNA AND DNA TO PROTEINS  Journal Article
• PROTON NMR AND STRUCTURAL FEATURES OF A 24-NUCLEOTIDE RNA HAIRPIN  Journal Article
• Photocross-linking of nucleic acids to associated proteins  Journal Article
• Poly-combing the genome for RNA  Journal Article
• Posttranscriptional modulation of TERC by PAPD5 inhibition rescues hematopoietic development in dyskeratosis congenita  Journal Article
• Principles and Properties of Eukaryotic mRNPs  Journal Article
• Promiscuous RNA binding by Polycomb repressive complex 2  Journal Article
• Quantitative assessment of EF-1 alpha center dot GTP binding to aminoacyl-tRNAs, aminoacyl-viral RNA, and tRNA shows close correspondence to the RNA binding properties of EF-Tu  Journal Article
• Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators  Journal Article
• RIBONUCLEOPROTEIN COMPLEXES OF R17 COAT PROTEIN AND A TRANSLATIONAL OPERATOR ANALOG  Journal Article
• RNA Binding Protein Vigilin Collaborates with miRNAs To Regulate Gene Expression for Caenorhabditis elegans Larval Development  Journal Article
• RNA decapping inside and outside of processing bodies  Journal Article
• RNA partitioning into stress granules is based on the summation of multiple interactions  Journal Article
• RNA recognition by the DNA end-binding Ku heterodimer  Journal Article
• RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome  Journal Article
• RNA structure comes of age  Journal Article
• RNA-BINDING PROPERTIES OF THE COAT PROTEIN FROM BACTERIOPHAGE GA  Journal Article
• RNA-BINDING SITE OF R17 COAT PROTEIN  Journal Article
• RNA-protein interactions that regulate pre-mRNA splicing  Journal Article
• RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome  Journal Article
• ROLES OF OPERATOR AND NON-OPERATOR RNA SEQUENCES IN BACTERIOPHAGE R17 CAPSID ASSEMBLY  Journal Article
• Rapid and widespread suppression of self-renewal by microRNA-203 during epidermal differentiation  Journal Article
• Removal of a single alpha-tubulin gene intron suppresses cell cycle arrest phenotypes of splicing factor mutations in Saccharomyces cerevisiae  Journal Article
• Riboswitches: Emerging themes in RNA structure and function  Journal Article
• Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination  Journal Article
• Sequence-specific interaction of R17 coat protein with its ribonucleic acid binding site.  Journal Article
• Sex lethal and U2 small nuclear ribonucleoprotein auxiliary factor (U2AF(65)) recognize polypyrimidine tracts using multiple modes of binding  Journal Article
• Somatic sex determination in Caenorhabditis elegans is modulated by SUP-26 repression of tra-2 translation  Journal Article
• Spen links RNA-mediated endogenous retrovirus silencing and X chromosome inactivation  Journal Article
• Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle  Journal Article
• Structure and dynamics of the iron responsive element RNA: Implications for binding of the RNA by iron regulatory binding proteins  Journal Article
• Structure of a class II TrmH tRNA-modifying enzyme from Aquifex aeolicus  Journal Article
• TDP-1, the Caenorhabditis elegans ortholog of TDP-43, limits the accumulation of double-stranded RNA  Journal Article
• TDP-43 and RNA form amyloid-like myo-granules in regenerating muscle  Journal Article
• THE ROLE OF 2'-HYDROXYL GROUPS IN AN RNA-PROTEIN INTERACTION  Journal Article
• Targeted mRNA Decay by RNA Binding Protein AUF1 Regulates Adult Muscle Stem Cell Fate, Promoting Skeletal Muscle Integrity  Journal Article
• Tau aggregates are RNA-protein assemblies that mislocalize multiple nuclear speckle components  Journal Article
• The Caenorhabditis elegans Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2  Journal Article
• The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA  Journal Article
• The RNA-binding protein Tsunagi interacts with Mago Nashi to establish polarity and localize oskar mRNA during Drosophila oogenesis  Journal Article
• The carboxy-terminal domain of the DExD/H protein YxiN is sufficient to confer specificity for 23 S rRNA  Journal Article
• The conserved RNA recognition motif 3 of U2 snRNA auxiliary factor (U2AF(65)) is essential in vivo but dispensable for activity in vitro  Journal Article
• The developmental timing regulator AIN-1 interacts with miRISCs and may target the argonaute protein ALG-1 to cytoplasmic P bodies in C. elegans  Journal Article
• The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold.  Journal Article
• The landscape of eukaryotic mRNPs  Journal Article
• The multilayered complexity of ceRNA crosstalk and competition  Journal Article
• The tRNA specificity of Thermus thermophilus EF-Tu  Journal Article
• Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions  Journal Article
• USING CIRCULAR PERMUTATION ANALYSIS TO REDEFINE THE R17 COAT PROTEIN-BINDING SITE  Journal Article
• Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses  Journal Article
• Using phosphorothioate-substituted RNA to investigate the thermodynamic role of phosphates in a sequence specific RNA-protein complex  Journal Article
• Widespread RNA binding by chromatin-associated proteins  Journal Article
• YxiN is a modular protein combining a DEx(D/H) core and a specific RNA-binding domain.  Journal Article
• hnRNPK recognition of the B motif of Xist and other biological RNAs  Journal Article
• mag-1, a homolog of Drosophila mago nashi regulates hermaphrodite germ-line sex determination in Caenorhabditis elegans  Journal Article
• mago nashi mediates the posterior follicle cell-to-oocyte signal to organize axis formation in Drosophila  Journal Article

broader concept

• Nucleoproteins  PubMed MeSh Term

narrower concept

• Nucleoproteins - Fragile X Mental Retardation Protein  PubMed MeSh Term
• Nucleoproteins - Gene Products, rev  PubMed MeSh Term
• Nucleoproteins - Host Factor 1 Protein  PubMed MeSh Term
• Nucleoproteins - RNA Cap-Binding Proteins  PubMed MeSh Term
• Nucleoproteins - RNA Recognition Motif Proteins  PubMed MeSh Term
• Nucleoproteins - RNA Splicing Factors  PubMed MeSh Term
• Nucleoproteins - Ribonucleoproteins  PubMed MeSh Term
• Nucleoproteins - mRNA Cleavage and Polyadenylation Factors  PubMed MeSh Term