Biochemical Phenomena - Promoter Regions, Genetic
PubMed MeSh Term
Overview
subject area of
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CHRNB2 promoter region: association with subjective effects to nicotine and gene expression differences Journal Article
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Cis regulatory requirements for vulval cell-specific expression of the Caenorhabditis elegans fibroblast growth factor gene egl-17 Journal Article
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TERT promoter mutations and telomerase reactivation in urothelial cancer Journal Article
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A Genetic Toolbox for Modulating the Expression of Heterologous Genes in the Cyanobacterium Synechocystis sp PCC 6803 Journal Article
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A Synonymous Mutation Upstream of the Gene Encoding a Weak-Link Enzyme Causes an Ultrasensitive Response in Growth Rate Journal Article
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A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus Journal Article
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A feed-forward repression mechanism anchors the Sin3/histone deacetylase and N-CoR/SMRT corepressors on chromatin Journal Article
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A generative model for the behavior of RNA polymerase Journal Article
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A global analysis of C. elegans trans-splicing Journal Article
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A kinetic model for the early steps of RNA synthesis by human RNA polymerase II Journal Article
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A novel two-step genome editing strategy with CRISPR-Cas9 provides new insights into telomerase action and TERT gene expression Journal Article
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A role for Chk1 in blocking transcriptional elongation of p21 RNA during the S-phase checkpoint Journal Article
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A stress-responsive glutathione S-transferase confers resistance to oxidative stress in Caenorhabditis elegans Journal Article
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A stress-sensitive reporter predicts longevity in isogenic populations of Caenorhabditis elegans Journal Article
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AP-1 functions upstream of CREB to control synaptic plasticity in Drosophila. Journal Article
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Actin is part of pre-initiation complexes and is necessary for transcription by RNA polymerase II Journal Article
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Allele-Specific DNA Methylation and Its Interplay with Repressive Histone Marks at Promoter-Mutant TERT Genes Journal Article
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Allele-specific proximal promoter hypomethylation of the telomerase reverse transcriptase gene (TERT) associates withTERTexpression in multiple cancers Journal Article
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An 8 nt RNA triggers a rate-limiting shift of RNA polymerase II complexes into elongation Journal Article
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Approximation of sojourn-times via maximal couplings: motif frequency distributions Journal Article
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Association of CHRN Genes With "Dizziness" to Tobacco Journal Article
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B2 RNA and Alu RNA repress transcription by disrupting contacts between RNA polymerase II and promoter DNA within assembled complexes Journal Article
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B2 RNA binds directly to RNA polymerase II to repress transcript synthesis Journal Article
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B2 RNA represses TFIIH phosphorylation of RNA polymerase II Journal Article
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BDNF promoter-mediated beta-galactosidase expression in the olfactory epithelium and bulb Journal Article
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BEHAVIOR OF GENES DIRECTLY INJECTED INTO THE RAT-HEART INVIVO Journal Article
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CALCIUM(II) SITE SPECIFICITY - EFFECT OF SIZE AND CHARGE ON METAL-ION BINDING TO AN EF-HAND-LIKE SITE Journal Article
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CCAAT/enhancer binding protein-delta expression is increased in fast skeletal muscle by food deprivation and regulates myostatin transcription in vitro Journal Article
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CDK8 Kinase Phosphorylates Transcription Factor STAT1 to Selectively Regulate the Interferon Response Journal Article
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CDK8 is a stimulus-specific positive coregulator of p53 target genes Journal Article
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CLONING THE COMPLETE RIIB GENE OF BACTERIOPHAGE-T4 AND SOME OBSERVATIONS CONCERNING ITS MIDDLE PROMOTERS Journal Article
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COOPERATIVE INTERACTIONS BETWEEN THE CAENORHABDITIS-ELEGANS HOMEOPROTEINS UNC-86 AND MEC-3 Journal Article
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Ca2+ activation of myofilaments from transgenic mouse hearts expressing R92Q mutant cardiac troponin T Journal Article
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Case-control and within-family tests for an association between conduct disorder and 5HTTLPR Journal Article
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Characterization of the DNA-binding property of Smad5 Journal Article
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Characterization of the sequence and architectural constraints of the regulatory and core regions of the human interleukin-2 promoter Journal Article
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Childhood maltreatment, subsequent antisocial behavior, and the role of monoamine oxidase A genotype Journal Article
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Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs Journal Article
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Chromatin signature of embryonic pluripotency is established during genome activation Journal Article
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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Journal Article
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Comparative functional analysis of the cow and mouse myostatin genes reveals novel regulatory elements in their upstream promoter regions Journal Article
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Competing promoters in prokaryotic transcription. Journal Article
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Contacts in context: promoter specificity and macromolecular interactions in transcription. Journal Article
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Core transcriptional regulatory circuitry in human hepatocytes Journal Article
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DISTINCT BEHAVIOR OF CARDIAC MYOSIN HEAVY-CHAIN GENE CONSTRUCTS INVIVO - DISCORDANCE WITH INVITRO RESULTS Journal Article
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DNA FUNCTIONAL-GROUPS REQUIRED FOR FORMATION OF OPEN COMPLEXES BETWEEN ESCHERICHIA-COLI RNA-POLYMERASE AND THE LAMBDA PR PROMOTER - IDENTIFICATION VIA BASE ANALOG SUBSTITUTIONS Journal Article
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DRD2 promoter methylation and measures of alcohol reward: functional activation of reward circuits and clinical severity Journal Article
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Defined structural changes occur in a nucleosome upon Amt1 transcription factor binding Journal Article
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Design and analysis of a robust genetic Muller C-element Journal Article
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Determinants for Efficient Editing with Cas9-Mediated Recombineering in Escherichia coli Journal Article
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Different pathways regulate expression of the skeletal myosin heavy chain genes Journal Article
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Differential regulation of p53 target genes: it's (core promoter) elementary Journal Article
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Differentially expressed fibroblast growth factors regulate skeletal muscle development through autocrine and paracrine mechanisms Journal Article
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Discovering Regulatory Overlapping RNA Transcripts Journal Article
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Disruption of promoter memory by synthesis of a long noncoding RNA Journal Article
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Distribution of NF-κB-binding sites across human chromosome 22 Journal Article
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Dysfunctional Attitudes and the Serotonin Transporter Promoter Polymorphism (5-HTTLPR) Journal Article
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ERK phosphorylation of MED14 in promoter complexes during mitogen-induced gene activation by Elk-1 Journal Article
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Enhancement of beta-globin locus control region-mediated transactivation by mitogen-activated protein kinases through stochastic and graded mechanisms Journal Article
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Exit from mitosis in Drosophila syncytial embryos requires proteolysis and cyclin degradation, and is associated with localized dephosphorylation. Journal Article
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Experimental strategies for analyzing oxygen sensing in yeast Journal Article
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Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs Journal Article
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Expression of myosin and actin in Escherichia coli. Journal Article
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Expression profiling identifies novel candidate genes for ethanol sensitivity QTLs Journal Article
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Extracellular signal-regulated kinase induces the megakaryocyte GPIIb/CD41 gene through MafB/Kreisler Journal Article
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Finding the start site: redefining the human initiator element Journal Article
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Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons Journal Article
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Gene-specific repression of the p53 target gene PUMA via intragenic CTCF-Cohesin binding Journal Article
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Generation of mammalian cells stably expressing multiple genes at predetermined levels Journal Article
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Genetic variation in the serotonin transporter gene influences ERP old/new effects during recognition memory Journal Article
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Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs Journal Article
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Genome-wide dose-dependent inhibition of histone deacetylases studies reveal their roles in enhancer remodeling and suppression of oncogenic super-enhancers Journal Article
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Genome-wide insights into eukaryotic transcriptional control. Journal Article
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Group 1 Innate Lymphoid Cell Lineage Identity Is Determined by a cis-Regulatory Element Marked by a Long Non-coding RNA Journal Article
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HIGH-LEVEL TRANSLATION INITIATION Journal Article
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HORMONAL MODULATION OF A GENE INJECTED INTO RAT-HEART INVIVO Journal Article
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Heat shock protein accumulation is upregulated in a long-lived mutant of Caenorhabditis elegans Journal Article
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Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock Journal Article
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Hypoxia and Lou Gehrig Journal Article
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IDENTIFICATION OF AN UPSTREAM ACTIVATION SEQUENCE AND OTHER CIS-ACTING ELEMENTS REQUIRED FOR TRANSCRIPTION OF COX6 FROM SACCHAROMYCES-CEREVISIAE Journal Article
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INHIBITION OF A SIGNALING PATHWAY IN CARDIAC-MUSCLE-CELLS BY ACTIVE MITOGEN-ACTIVATED PROTEIN-KINASE KINASE Journal Article
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ISOLATION AND CHARACTERIZATION OF A CDNA CLONE FOR BOVINE CYTOCHROME-C OXIDASE SUBUNIT-IV Journal Article
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ISOLATION AND CHARACTERIZATION OF A YEAST-STRAIN CARRYING A MUTATION IN THE MITOCHONDRIAL PROMOTER FOR COX2 Journal Article
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Identification of a cis-acting regulatory element conferring inducibility of the atrial natriuretic factor gene in acute pressure overload Journal Article
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Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods Journal Article
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In Vivo Characterization of Linc-p21 Reveals Functional cis-Regulatory DNA Elements Journal Article
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In vitro studies of the early steps of RNA synthesis by human RNA polymerase II Journal Article
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Infection by Herpes Simplex Virus 1 Causes Near-Complete Loss of RNA Polymerase II Occupancy on the Host Cell Genome Journal Article
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Insulin-like Signaling Determines Survival during Stress via Posttranscriptional Mechanisms in C. elegans Journal Article
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Interaction of the Ski oncoprotein with Smad3 regulates TGF-β signaling Journal Article
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Intracellular calcium and myosin isoform transitions - Calcineurin and calcium-calmodulin kinase pathways regulate preferential activation of the iia myosin heavy chain promoter Journal Article
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Kinetic and mechanistic analysis of the RNA polymerase II transcrption reaction at the human interleukin-2 promoter. Journal Article
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Localization of RNAPII and 3 ' end formation factor CstF subunits on C. elegans genes and operons Journal Article
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Long Noncoding RNAs: Molecular Modalities to Organismal Functions Journal Article
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Loss of MeCP2 in adult 5-HT neurons induces 5-HT1A autoreceptors, with opposite sex-dependent anxiety and depression phenotypes Journal Article
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MAP kinase phosphatase-1 deficiency impairs skeletal muscle regeneration and exacerbates muscular dystrophy Journal Article
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MUTANTS OF THE LAC PROMOTER WITH LARGE INSERTIONS AND DELETIONS BETWEEN THE CAP BINDING-SITE AND THE -35 REGION Journal Article
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Making sense (and antisense) of myosin heavy chain gene expression. Comments on "Intergenic bidirectional promoter and cooperative regulation of the IIx and IIb MHC genes in fast skeletal muscle" by Rinaldi et al. Journal Article
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Mediator and cohesin connect gene expression and chromatin architecture Journal Article
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Mediator and post-recruitment regulation of RNA polymerase II. Journal Article
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Mesenchymal and MAPK Expression Signatures Associate with Telomerase Promoter Mutations in Multiple Cancers Journal Article
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Microarray analysis and motif detection reveal new targets of the Salmonella enterica serovar typhimurium HilA regulatory protein, including hilA itself Journal Article
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Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR Journal Article
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Monitoring transcriptional activity by RNA polymerase II in vitro using single molecule co-localization Journal Article
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Mouse B2 SINE elements function as IFN-inducible enhancers Journal Article
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Multiparametric image analysis of lung-branching morphogenesis Journal Article
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Multiple yeast genes, including Paf1 complex genes, affect telomere length via telomerase RNA abundance Journal Article
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Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers Journal Article
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Myh7b/miR-499 gene expression is transcriptionally regulated by MRFs and Eos Journal Article
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MyoD, Myf5, and the calcineurin pathway activate the developmental myosin heavy chain genes Journal Article
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Myocyte enhancer factor-2 and serum response factor binding elements regulate fast myosin heavy chain transcription in vivo Journal Article
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NFATc2 recruits cJun homodimers to an NFAT site to synergistically activate interleukin-2 transcription Journal Article
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Nicotianamine, a Novel Enhancer of Rice Iron Bioavailability to Humans Journal Article
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Noncoding RNAs: Regulators of the Mammalian Transcription Machinery Journal Article
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Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA Journal Article
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OLIGORIBONUCLEOTIDE SYNTHESIS USING T7 RNA-POLYMERASE AND SYNTHETIC DNA TEMPLATES Journal Article
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OmpR regulates the two-component system SsrA-SsrB in Salmonella pathogenicity island 2 Journal Article
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Opinion - Regulatory diversity among metazoan co-activator complexes Journal Article
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PHAGE-T4 EXPRESSION VECTOR - PROTECTION FROM PROTEOLYSIS Journal Article
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Peroxisome proliferator-activated receptor γ inhibits transforming growth factor β-induced connective tissue growth factor expression in human aortic smooth muscle cells by interfering with Smad3 Journal Article
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Phosphorylation within the transactivation domain of adenovirus E1A protein by mitogen-activated protein kinase regulates expression of early region 4 Journal Article
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Poly-combing the genome for RNA Journal Article
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Posttranscriptional mechanisms involving microRNA-27a and b contribute to fast-specific and glucocorticoid-mediated myostatin expression in skeletal muscle Journal Article
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Potential limitations of transcription terminators used as transgene insulators in adenoviral vectors. Journal Article
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Prolonged Cre expression driven by the α-myosin heavy chain promoter can be cardiotoxic Journal Article
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Promoter escape limits the rate of RNA polymerase II transcription and is enhanced by TFIIE, TFIIH, and ATP on negatively supercoiled DNA Journal Article
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Promoter scanning for transcription inhibition with DNA-binding polyamides Journal Article
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Prospects for gene therapy with direct injection of polynucleotides Journal Article
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Purification and mass spectrometric identification of GA-binding protein (GABP) as the functional pituitary Ets factor binding to the basal transcription element of the prolactin promoter Journal Article
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QUANTITATIVE-DETERMINATION OF ADENOVIRUS-MEDIATED GENE DELIVERY TO RAT CARDIAC MYOCYTES IN-VITRO AND IN-VIVO Journal Article
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REGULATION OF YEAST COX6 BY THE GENERAL TRANSCRIPTION FACTOR ABF1 AND SEPARATE HAP2-RESPONSIVE AND HEME-RESPONSIVE ELEMENTS Journal Article
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RNA Pol II transcription model and interpretation of GRO-seq data Journal Article
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RNA Polymerase II and TAFs Undergo a Slow Isomerization after the Polymerase Is Recruited to Promoter-Bound TFIID Journal Article
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RNA Seeds Higher-Order Assembly of FUS Protein Journal Article
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Rational promoter selection for gene transfer into cardiac cells Journal Article
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Recapitulation of human betaB1-crystallin promoter activity in transgenic zebrafish. Journal Article
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Regulation of TCF3 by Wnt-Dependent Phosphorylation during Vertebrate Axis Specification Journal Article
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Regulation of myostatin expression and myoblast differentiation by FoxO and SMAD transcription factors Journal Article
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Regulation of open complex formation at the Escherichia coli galactose operon promoters. Simultaneous interaction of RNA polymerase, gal repressor and CAP/cAMP. Journal Article
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Regulatory sharing between estrogen receptor α bound enhancers Journal Article
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Release of Human TFIIB from Actively Transcribing Complexes Is Triggered upon Synthesis of 7-and 9-nt RNAs Journal Article
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Repression of p53-mediated transcription by MDM2: a dual mechanism Journal Article
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SYNTHESIS OF SMALL RNAS USING T7 RNA-POLYMERASE Journal Article
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Selection and Characterization of a DNA Aptamer That Can Discriminate between cJun/cJun and cJun/cFos Journal Article
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Selective binding of Escherichia coli RNA polymerase to topoisomers of minicircles carrying the TAC16 and TAC17 promoters. Journal Article
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Single molecule microscopy reveals mechanistic insight into RNA polymerase II preinitiation complex assembly and transcriptional activity Journal Article
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Single molecule studies of RNA polymerase II transcription in vitro. Journal Article
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Single-cell imaging reveals unexpected heterogeneity of telomerase reverse transcriptase expression across human cancer cell lines Journal Article
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Skeletal muscle expression of bone morphogenetic protein-1 and tolloid-like-1 extracellular proteases in different fiber types and in response to unloading, food deprivation and differentiation Journal Article
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Skeletal myosin heavy chain function in cultured lung myofibroblasts Journal Article
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Structural basis for inactivation of PRC2 by G-quadruplex RNA Journal Article
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Structural visualization of key steps in human transcription initiation Journal Article
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Structure and function of CRSP/Med2: A promoter-selective transcriptional coactivator complex Journal Article
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Structure of the universal stress protein of Haemophilus influenzae. Journal Article
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Synergistic cooperation of TFE3 and Smad proteins in TGF-β-induced transcription of the plasminogen activator inhibitor-1 gene Journal Article
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TELOMERASE RNAS OF DIFFERENT CILIATES HAVE A COMMON SECONDARY STRUCTURE AND A PERMUTED TEMPLATE Journal Article
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TFIID Enables RNA Polymerase II Promoter-Proximal Pausing Journal Article
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THE ROLE OF THE TRP1 GENE IN YEAST TRYPTOPHAN BIOSYNTHESIS Journal Article
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THYROID-HORMONE REGULATES EXPRESSION OF A TRANSFECTED HUMAN ALPHA-MYOSIN HEAVY-CHAIN FUSION GENE IN FETAL-RAT HEART-CELLS Journal Article
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TRANSCRIPTIONAL ACTIVATION OF BACTERIOPHAGE-T4 MIDDLE PROMOTERS BY THE MOTA PROTEIN Journal Article
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TRANSLATIONAL REGULATION OF EXPRESSION OF THE BACTERIOPHAGE-T4 LYSOZYME GENE Journal Article
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TRIM28 is a transcriptional activator of the mutant TERT in human bladder cancer Journal Article
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TRIM28 regulates RNA polymerase II promoter-proximal pausing and pause release Journal Article
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Tax recruitment of CBP/p300, via the KIX domain, reveals a potent requirement for acetyltransferase activity that is chromatin dependent and histone tail independent Journal Article
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Telomerase in Bladder Cancer: Back to a Better Future? Journal Article
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The Aromatase Gene CYP19A1: Several Genetic and Functional Lines of Evidence Supporting a Role in Reading, Speech and Language Journal Article
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The C-terminal region of human NFATc2 binds dun to synergistically activate interleukin-2 transcription Journal Article
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The Caenorhabditis elegans ect-2 RhoGEF gene regulates cytokinesis and migration of epidermal P cells Journal Article
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The Herpes Simplex Virus 1 Protein ICP4 Acts as both an Activator and a Repressor of Host Genome Transcription during Infection Journal Article
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The Interrelationship between Promoter Strength, Gene Expression, and Growth Rate Journal Article
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The Ku protein complex interacts with YY1, is up-regulated in human heart failure, and represses α myosin heavy-chain gene expression Journal Article
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The Non-Coding B2 RNA Binds to the DNA Cleft and Active-Site Region of RNA Polymerase II Journal Article
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The adjacent dnaZ and dnaX genes of Escherichia coli are contained within one continuous open reading frame. Journal Article
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The basic leucine zipper domain of c-Jun functions in transcriptional activation through interaction with the N terminus of human TATA-binding protein-associated factor-1 (human TAFII250) Journal Article
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The elongation factor Spn1 is a multi-functional chromatin binding protein Journal Article
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The essential and multifunctional TFIIH complex Journal Article
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The mouse mammary tumour virus promoter positioned on a tetramer of histones H3 and H4 binds nuclear factor 1 and OTF1 Journal Article
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The sequence at specific positions in the early transcribed region sets the rate of transcript synthesis by RNA polymerase II in vitro Journal Article
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The transcription start site landscape of C. elegans Journal Article
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The use of in ovo electroporation for the rapid analysis of neural-specific murine enhancers Journal Article
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The β-catenin/VegT-regulated early zygotic gene Xnr5 is a direct target of SOX3 regulation Journal Article
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The β3 subunit of the nicotinic acetylcholine receptor: Modulation of gene expression and nicotine consumption Journal Article
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Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast Journal Article
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Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II. Journal Article
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Transcriptional organization of the Escherichia coli dnaX gene. Journal Article
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Transcriptional regulation of IGF-I expression in skeletal muscle Journal Article
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Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape Journal Article
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Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation Journal Article
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Valvular myofibroblast activation by transforming growth factor-β -: Implications for pathological extracellular matrix remodeling in heart valve disease Journal Article
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WILD-TYPE BACTERIOPHAGE-T4 IS RESTRICTED BY THE LAMBDA-REX-GENES Journal Article
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Yin Yang 1 is increased in human heart failure and represses the activity of the human alpha-myosin heavy chain promoter Journal Article
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alpha-7 Nicotinic receptor gene promoter polymorphisms in inbred mice affect expression in a cell type-specific fashion Journal Article
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p300-mediated tax transactivation from recombinant chromatin: Histone tail deletion mimics coactivator function Journal Article
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p53 activates transcription by directing structural shifts in Mediator Journal Article
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p53 suppresses muscle differentiation at the myogenin step in response to genotoxic stress Journal Article
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ΔNp63α utilizes multiple mechanisms to repress transcription in squamous cell carcinoma cells Journal Article
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