Binding Sites
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Overview
subject area of
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3-DIMENSIONAL MODEL OF THE ACTIVE-SITE OF THE SELF-SPLICING RIBOSOMAL-RNA PRECURSOR OF TETRAHYMENA Journal Article
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A 29 residue region of the sarcomeric myosin rod is necessary for filament formation Journal Article
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A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch Journal Article
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A Genetic Toolbox for Modulating the Expression of Heterologous Genes in the Cyanobacterium Synechocystis sp PCC 6803 Journal Article
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A Novel Saturation Mutagenesis Approach: Single Step Characterization of Regulatory Protein Binding Sites in RNA Using Phosphorothioates Journal Article
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A POSITIVE ENTROPY CHANGE FOR GUANOSINE BINDING AND FOR THE CHEMICAL STEP IN THE TETRAHYMENA RIBOZYME REACTION Journal Article
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A SPECIFIC, UV-INDUCED RNA PROTEIN CROSS-LINK USING 5-BROMOURIDINE-SUBSTITUTED RNA Journal Article
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A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus Journal Article
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A TETRAHYMENA INTRON NUCLEOTIDE CONNECTED TO THE GTP ARGININE SITE Journal Article
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A Transcriptional Enhancer from the Coding Region of ADAMTS5 Journal Article
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A bipartite polymerase-processivity factor interaction: only the internal beta binding site of the alpha subunit is required for processive replication by the DNA polymerase III holoenzyme. Journal Article
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A distinct nuclear localization signal in the N terminus of Smad 3 determines its ligand-induced nuclear translocation Journal Article
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A feed-forward repression mechanism anchors the Sin3/histone deacetylase and N-CoR/SMRT corepressors on chromatin Journal Article
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A filter assay for thymidylate synthetase using 5-fluoro-2'-deoxyuridylate as an active site titrant. Journal Article
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A functional genetic screen reveals sequence preferences within a key tertiary interaction in cobalamin riboswitches required for ligand selectivity Journal Article
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A general strategy to solve the phase problem in RNA crystallography Journal Article
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A genetic screen identifies novel non-compatible IoxP sites Journal Article
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A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs Journal Article
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A kinetic and thermodynamic analysis of cleavage site mutations in the hammerhead ribozyme Journal Article
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A moving story Journal Article
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A network of heterogeneous hydrogen bonds in GNRA tetraloops Journal Article
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A new look at the microtubule binding patterns of dimeric kinesins Journal Article
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A novel mechanism for regulating transforming growth factor β (TGF-β) signaling -: Functional modulation of type III TGF-β receptor expression through interaction with the PDZ domain protein, GIPC Journal Article
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A preorganized active site in the crystal structure of the Tetrahymena ribozyme Journal Article
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A semiconserved residue inhibits complex formation by stabilizing interactions in the free state of a theophylline-binding RNA Journal Article
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A simple crosslinking method, CLAMP, to map the sites of RNA-contacting domains within a protein. Journal Article
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A single-molecule analysis reveals morphological targets for cellulase synergy Journal Article
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A specific RNA structural motif mediates high affinity binding by the HIV-1 nucleocapsid protein (NCp7) Journal Article
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A stem-loop of Tetrahymena telomerase RNA distant from the template potentiates RNA folding and telomerase activity Journal Article
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A sulfhydryl group is not the covalent catalyst in the thymidylate synthetase reaction. Journal Article
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A therapeutic aptamer inhibits angiogenesis by specifically targeting the heparin binding domain of VEGF165 Journal Article
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A thermodynamic analysis of the sequence-specific binding of RNA by bacteriophage MS2 coat protein Journal Article
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ABF1 IS A PHOSPHOPROTEIN AND PLAYS A ROLE IN CARBON SOURCE CONTROL OF COX6 TRANSCRIPTION IN SACCHAROMYCES-CEREVISIAE Journal Article
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ACTIVATION OF THE PHOSPHOSIGNALING PROTEIN CHEY .1. ANALYSIS OF THE PHOSPHORYLATED CONFORMATION BY F-19 NMR AND PROTEIN ENGINEERING Journal Article
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ALTERED CRO REPRESSORS FROM ENGINEERED MUTAGENESIS OF A SYNTHETIC CRO GENE Journal Article
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AMINOACYL ESTERASE-ACTIVITY OF THE TETRAHYMENA RIBOZYME Journal Article
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AN ULTRAVIOLET-INDUCIBLE ADENOSINE ADENOSINE CROSS-LINK REFLECTS THE CATALYTIC STRUCTURE OF THE TETRAHYMENA RIBOZYME Journal Article
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ATTRACTANT-INDUCED AND DISULFIDE-INDUCED CONFORMATIONAL-CHANGES IN THE LIGAND-BINDING DOMAIN OF THE CHEMOTAXIS ASPARTATE RECEPTOR - A F-19 NMR-STUDY Journal Article
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AUTOGENOUS REGULATORY SITE ON THE BACTERIOPHAGE-T4 GENE-32 MESSENGER-RNA Journal Article
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Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2 Journal Article
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Activation of ATF6 and an ATF6 DNA binding site by the endoplasmic reticulum stress response Journal Article
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Activation of the erythropoietin receptor by the gp55-P viral envelope protein is determined by a single amino acid in its transmembrane domain Journal Article
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Active site dynamics in the lead-dependent ribozyme Journal Article
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Adaptive Ligand Binding by the Purine Riboswitch in the Recognition of Guanine and Adenine Analogs Journal Article
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Adrenal androgen production in catarrhine primates and the evolution of adrenarche. Journal Article
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Allosteric drugs: thinking outside the active-site box. Journal Article
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Amino acid specificity in translation. Journal Article
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Amyloid-like amelogenin nanoribbons template mineralization via a low-energy interface of ion binding sites Journal Article
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An RNA internal loop acts as a hinge to facilitate ribozyme folding and catalysis Journal Article
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An improved MS2 system for accurate reporting of the mRNA life cycle Journal Article
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An uncapped RNA suggests a model for Caenorhabditis elegans polycistronic pre-mRNA processing. Journal Article
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Ancient and Recent Adaptive Evolution of Primate Non-Homologous End Joining Genes Journal Article
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Antiestrogen binding site and estrogen receptor mediate uptake and distribution of 4-hydroxytamoxifen-targeted doxorubicin-formaldehyde conjugate in breast cancer cells. Journal Article
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Architecture of the Synaptophysin/Synaptobrevin Complex: Structural Evidence for an Entropic Clustering Function at the Synapse Journal Article
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Arg304 of human DNA primase is a key contributor to catalysis and NTP binding: Primase and the family X polymerases share significant sequence homology Journal Article
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Assembly of Membrane-Bound Protein Complexes: Detection and Analysis by Single Molecule Diffusion Journal Article
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Association of v-ErbA with Smad4 Disrupts TGF-beta Signaling Journal Article
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Atomic level architecture of group I introns revealed Journal Article
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B2 RNA binds directly to RNA polymerase II to repress transcript synthesis Journal Article
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B2 RNA represses TFIIH phosphorylation of RNA polymerase II Journal Article
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BACTERIOPHAGE-T4 REGA PROTEIN BINDS TO MESSENGER-RNAS AND PREVENTS TRANSLATION INITIATION Journal Article
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BINDING OF THE BACTERIOPHAGE-T4 REGA PROTEIN TO MESSENGER-RNA TARGETS - AN INITIATOR AUG IS REQUIRED Journal Article
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BIOLOGICAL CATALYSIS BY RNA Journal Article
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Binding of europium(III) ions to RNA stem loops: Role of the primary hydration sphere in complex formation Journal Article
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Binding of misacylated tRNAs to the ribosomal A site. Journal Article
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Binding of yeast tRNAPhe anticodon arm to Escherichia coli 30 S ribosomes. Journal Article
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Biophysical analysis and small-angle X-ray scattering-derived structures of MeCP2-nucleosome complexes Journal Article
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Biotin tagging deletion analysis of domain limits involved in protein-macromolecular interactions. Mapping the tau binding domain of the DNA polymerase III alpha subunit. Journal Article
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Blocking transcription through a nucleosome with synthetic DNA ligands Journal Article
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Bro1 binding to Snf7 regulates ESCRT-III membrane scission activity in yeast Journal Article
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Bro1 stimulates Vps4 to promote intralumenal vesicle formation during multivesicular body biogenesis Journal Article
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C2 domains from different Ca2+ signaling pathways display functional and mechanistic diversity Journal Article
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C2 domains of protein kinase C isoforms α, β, and γ:: Activation parameters and calcium stoichiometries of the membrane-bound state Journal Article
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CALF THYMUS DNA-POLYMERASE ALPHA-PRIMASE - COMMUNICATION AND PRIMER-TEMPLATE MOVEMENT BETWEEN THE 2 ACTIVE-SITES Journal Article
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CATALYSIS OF RNA CLEAVAGE BY A RIBOZYME DERIVED FROM THE GROUP-I INTRON OF ANABAENA PRE-TRNA(LEU) Journal Article
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CATALYSIS OF RNA CLEAVAGE BY THE TETRAHYMENA-THERMOPHILA RIBOZYME .2. KINETIC DESCRIPTION OF THE REACTION OF AN RNA SUBSTRATE THAT FORMS A MISMATCH AT THE ACTIVE-SITE Journal Article
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CBX3 regulates efficient RNA processing genome-wide Journal Article
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CHRNA4 and tobacco dependence - From gene regulation to treatment outcome Journal Article
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CHROMATIN STRUCTURE OF THE RIBOSOMAL-RNA GENES OF TETRAHYMENA-THERMOPHILA AS ANALYZED BY TRIMETHYLPSORALEN CROSSLINKING INVIVO Journal Article
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CIRCULARLY PERMUTED TRANSFER-RNAS AS SPECIFIC PHOTOAFFINITY PROBES OF RIBONUCLEASE-P RNA STRUCTURE Journal Article
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COMPARISON OF OPERATOR-SPECIFIC AND NONSPECIFIC DNA-BINDING OF THE LAMBDA-CI REPRESSOR - [KC1] AND PH EFFECTS Journal Article
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COMPARISON OF THE D-LACTATE STEREOSPECIFIC DEHYDROGENASE OF LIMULUS-POLYPHEMUS WITH ACTIVE-SITE REGIONS OF L-LACTATE DEHYDROGENASES Journal Article
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COMPARISON OF UBIQUINOL AND CYTOCHROME-C TERMINAL OXIDASES - AN ALTERNATIVE VIEW Journal Article
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CONSERVED PROTEIN DOMAINS IN A MYOSIN HEAVY-CHAIN GENE FROM DICTYOSTELIUM-DISCOIDEUM Journal Article
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CONTRIBUTIONS OF 2'-HYDROXYL GROUPS OF THE RNA SUBSTRATE TO BINDING AND CATALYSIS BY THE TETRAHYMENA RIBOZYME - AN ENERGETIC PICTURE OF AN ACTIVE-SITE COMPOSED OF RNA Journal Article
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COOPERATIVE BINDING OF R17 COAT PROTEIN TO RNA Journal Article
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CREB binds to multiple loci on human chromosome 22 Journal Article
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Ca2+-signaling cycle of a membrane-docking C2 domain Journal Article
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Caenorhabditis elegans CED-9 protein is a bifunctional cell-death inhibitor Journal Article
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Call activation of the cPLA(2) C2 domain: Ordered binding of two Ca2+ ions with positive cooperativity Journal Article
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Caspase-activated phosphoinositide binding by CNT-1 promotes apoptosis by inhibiting the AKT pathway Journal Article
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Cell biology - Lessons in rational drug design for protein kinases Journal Article
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Cellular zinc status alters chromatin accessibility and binding of p53 to DNA. Journal Article
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Centromere protein F includes two sites that couple efficiently to depolymerizing microtubules Journal Article
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Changes in protein conformational mobility upon activation of extracellular regulated protein kinase-2 as detected by hydrogen exchange Journal Article
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Chaperone Nap1 Shields Histone Surfaces Used in a Nucleosome and Can Put H2A-H2B in an Unconventional Tetrameric Form Journal Article
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Characterization of 2'(3')-trinitrophenyl-ATP as an inhibitor of ATP-dependent initiation complex formation between the DNA polymerase III holoenzyme and primed DNA. Journal Article
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CheA kinase of bacterial chemotaxis: Chemical mapping of four essential docking sites Journal Article
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Chemical shift as a probe of molecular interfaces: NMR studies of DNA binding by the three amino-terminal zinc finger domains from transcription factor IIIA. Journal Article
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Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs Journal Article
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ClpS is an essential component of the N-end rule pathway in Escherichia coli Journal Article
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Cobalamin riboswitches exhibit a broad range of ability to discriminate between methylcobalamin and adenosylcobalamin Journal Article
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Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology Journal Article
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Comparative sequence analysis of the complete human sarcomeric myosin heavy chain family: Implications for functional diversity Journal Article
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Competition between PRC2.1 and 2.2 subcomplexes regulates PRC2 chromatin occupancy in human stem cells Journal Article
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Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA. Journal Article
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Complementary oligonucleotide binding to transfer RNA. Journal Article
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Computational Screening of Biomolecular Adsorption and Self-Assembly on Nanoscale Surfaces Journal Article
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Conformational switches involved in orchestrating the successive steps of group I RNA splicing Journal Article
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Connecting Protein Conformation and Dynamics with Ligand-Receptor Binding Using Three-Color Forster Resonance Energy Transfer Tracking Journal Article
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Conserved structure for single-stranded telomeric DNA recognition Journal Article
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Contribution of the esterified amino acid to the binding of aminoacylated tRNAs to the ribosomal P- and A-sites. Journal Article
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Converging free energies of binding in cucurbit[7]uril and octa-acid host-guest systems from SAMPL4 using expanded ensemble simulations Journal Article
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Cooperative binding of single-stranded telomeric DNA by the Pot1 protein of Schizosaccharomyces pombe Journal Article
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Copper(II) Binding by Dissolved Organic Matter: Importance of the Copper-to-Dissolved Organic Matter Ratio and Implications for the Biotic Ligand Model Journal Article
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Crystal structure of Escherichia coli ArnA (PmrI) decarboxylase domain.: A key enzyme for lipid a modification with 4-amino-4-deoxy-L-arabinose and polymyxin resistance Journal Article
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Crystal structure of NFAT bound to the HIV-1 LTR tandem κB enhancer element Journal Article
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Crystal structure of Skp, a prefoldin-like chaperone that protects soluble and membrane proteins from aggregation Journal Article
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Crystal structure of a bacterial ribonuclease P RNA Journal Article
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Crystal structure of a group I ribozyme domain: Principles of RNA packing Journal Article
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Crystal structure of the ribonucleoprotein core of the signal recognition particle Journal Article
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Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands Journal Article
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Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure Journal Article
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Crystallographic Recognition Controls Peptide Binding for Bio-Based Nanomaterials Journal Article
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Cyp33 binds AU-rich RNA motifs via an extended interface that competitively disrupts the gene repressive Cyp33-MLL1 interaction in vitro Journal Article
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Cytochrome c oxidase: Chemistry of a molecular machine Book
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DEFINING A SMALLER RNA SUBSTRATE FOR ELONGATION-FACTOR TU Journal Article
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DEFINING THE INSIDE AND OUTSIDE OF A CATALYTIC RNA MOLECULE Journal Article
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DETERMINATION OF RNA PROTEIN CONTACTS USING THIOPHOSPHATE SUBSTITUTIONS Journal Article
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DETERMINATION OF V-MOS-CATALYZED PHOSPHORYLATION SITES AND AUTOPHOSPHORYLATION SITES ON MAP KINASE KINASE BY ESI/MS Journal Article
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Defined structural changes occur in a nucleosome upon Amt1 transcription factor binding Journal Article
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Delineation of the high-affinity single-stranded telomeric DNA-binding domain of Saccharomyces cerevisiae Cdc13 Journal Article
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Dependence of site-2 protease cleavage of ATF6 on prior site-1 protease digestion is determined by the size of the luminal domain of ATF6 Journal Article
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Deuterium exchange mass spectrometry as a probe of protein kinase activation. Analysis of wild-type and constitutively active mutants of MAP kinase kinase-1 Journal Article
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Did2 coordinates Vps4-mediated dissociation of ESCRT-III from endosomes Journal Article
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Discriminating between HuR and TTP binding sites using the k-spectrum kernel method Journal Article
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Discrimination against RNA Backbones by a ssDNA Binding Protein Journal Article
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Disruption of promoter memory by synthesis of a long noncoding RNA Journal Article
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Dissecting neural differentiation regulatory networks through epigenetic footprinting Journal Article
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Dissecting the Innate Immune Recognition of Opioid Inactive Isomer (+)-Naltrexone Derived Toll-like Receptor 4 (TLR4) Antagonists Journal Article
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Distinct conformational states of nuclear receptor-bound CRSP-Med complexes Journal Article
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Distribution of NF-κB-binding sites across human chromosome 22 Journal Article
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Doc2b promotes GLUT4 exocytosis by activating the SNARE-mediated fusion reaction in a calcium-and membrane bending-dependent manner Journal Article
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Docking motif interactions in MAP kinases revealed by hydrogen exchange mass spectrometry Journal Article
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Drosophila sex-lethal protein mediates polyadenylation switching in the female germline Journal Article
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EFFECT OF TRAINING ON BETA-ADRENERGIC-RECEPTOR NUMBER IN RAT-HEART Journal Article
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Edc3 Function in Yeast and Mammals Is Modulated by Interaction with NAD-Related Compounds Journal Article
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Effect of Benzyl Alcohol on Recombinant Human Interleukin-1 Receptor Antagonist Structure and Hydrogen-Deuterium Exchange Journal Article
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Effect of zinc binding and precipitation on structures of recombinant human growth hormone and nerve growth factor Journal Article
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Effects of divalent metal ions on individual steps of the Tetrahymena ribozyme reaction Journal Article
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Effects of nucleotide analogues on Euplotes aediculatus telomerase processivity: Evidence for product-assisted translocation Journal Article
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Electrostatic interactions in the reconstitution of an SH2 domain from constituent peptide fragments Journal Article
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Elucidating sequence and solvent specific design targets to protect and stabilize enzymes for biocatalysis in ionic liquids Journal Article
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Energetics and affinity of the histone octamer for defined DNA sequences Journal Article
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Enhanced selectivities for the hydroxyl-directed methanolysis of esters using the 2-acyl-4-aminopyridine class of acyl transfer catalysts: Ketones as binding sites Journal Article
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Enhancer RNA profiling predicts transcription factor activity Journal Article
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Essential regions of Saccharomyces cerevisiae telomerase RNA: separate elements for Est1p and Est2p interaction. Journal Article
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Estrogen-related receptor alpha 1 functionally binds as a monomer to extended half-site sequences including ones contained within estrogen-response elements Journal Article
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Evaluation of methylphosphonates as analogs for detecting phosphate contacts in RNA-protein complexes Journal Article
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Evidence that both ligand binding and covalent adaptation drive a two-state equilibrium in the aspartate receptor signaling complex Journal Article
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Evolutionarily Conserved Allosteric Communication in Protein Tyrosine Phosphatases Journal Article
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Exocyclic amine of the conserved G center dot U pair at the cleavage site of the Tetrahymena ribozyme contributes to 5'-splice site selection and transition state stabilization Journal Article
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Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins Journal Article
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Exploring the specificity of bacterial elongation factor Tu for different tRNAs. Journal Article
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Expression of the human papillomavirus type 11 L1 capsid protein in Escherichia coli: Characterization of protein domains involved in DNA binding and capsid assembly Journal Article
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Fast-Find: A novel computational approach to analyzing combinatorial motifs Journal Article
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Forward and reverse motion of single RecBCD molecules on DNA Journal Article
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Free State Conformational Sampling of the SAM-I Riboswitch Aptamer Domain Journal Article
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From oligonucleotide shapes to genomic SELEX: Novel biological regulatory loops Journal Article
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From phage display to structure: an interplay of enthalpy and entropy in the binding of the LDHSLHS polypeptide to silica Journal Article
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Functional analysis of myosin mutations that cause familial hypertrophic cardiomyopathy Journal Article
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Functional redundancy of worm splicelosomal proteins U1A and U2B" Journal Article
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GUANOSINE BINDING TO THE TETRAHYMENA RIBOZYME - THERMODYNAMIC COUPLING WITH OLIGONUCLEOTIDE BINDING Journal Article
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Genome-Wide Identification of Alternatively Spliced mRNA Targets of Specific RNA-Binding Proteins Journal Article
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Genome-wide analysis of Musashi-2 targets reveals novel functions in governing epithelial cell migration Journal Article
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Genomic and cDNA selection-amplification identifies transcriptome-wide binding sites for the Drosophila protein sex-lethal Journal Article
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Global analysis of p53-regulated transcription identifies its direct targets and unexpected regulatory mechanisms Journal Article
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Global analysis of yeast mRNPs Journal Article
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HETEROLOGOUS EXPRESSION OF A CARDIOMYOPATHIC MYOSIN THAT IS DEFECTIVE IN ITS ACTIN INTERACTION Journal Article
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HIGH-AFFINITY RNA LIGANDS TO ESCHERICHIA-COLI RIBOSOMES AND RIBOSOMAL-PROTEIN S1 - COMPARISON OF NATURAL AND UNNATURAL BINDING-SITES Journal Article
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HIGH-AFFINITY SSDNA INHIBITORS OF THE REVERSE-TRANSCRIPTASE OF TYPE-1 HUMAN-IMMUNODEFICIENCY-VIRUS Journal Article
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HIGH-RESOLUTION MOLECULAR DISCRIMINATION BY RNA Journal Article
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HMGB1 Activates Proinflammatory Signaling via TLR5 Leading to Allodynia Journal Article
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HOW LAC REPRESSOR RECOGNIZES LAC OPERATOR Journal Article
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Harnessing the mechanism of glutathione reductase for synthesis of active site bound metallic nanoparticles and electrical connection to electrodes Journal Article
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High Throughput Sequencing Identifies Misregulated Genes in the Drosophila Polypyrimidine Tract-Binding Protein (hephaestus) Mutant Defective in Spermatogenesis Journal Article
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Histone Parylation factor 1 contributes to the inhibition of PARP1 by cancer drugs Journal Article
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Histone chaperones and nucleosome assembly Journal Article
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Hot-spot mutants of p53 core domain evince characteristic local structural changes. Journal Article
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Human CRSP interacts with RNA polymerase IICTD and adopts a specific CTD-bound conformation Journal Article
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Human DNA primase uses Watson-Crick hydrogen bonds to distinguish between correct and incorrect nucleoside triphosphates Journal Article
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Hydrogen bonding between sugar and protein is responsible for inhibition of dehydration-induced protein unfolding Journal Article
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Hydrogen exchange solvent protection by an ATP analogue reveals conformational changes in ERK2 upon activation Journal Article
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IDENTIFICATION OF RIBOZYMES WITHIN A RIBOZYME LIBRARY THAT EFFICIENTLY CLEAVE A LONG SUBSTRATE RNA Journal Article
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IDENTIFICATION OF SEQUENCES NECESSARY FOR THE ASSOCIATION OF CARDIAC MYOSIN SUBUNITS Journal Article
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INFORMATION-CONTENT OF BINDING-SITES ON NUCLEOTIDE-SEQUENCES Journal Article
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INHIBITION OF THE CAENORHABDITIS-ELEGANS CELL-DEATH PROTEASE CED-3 BY A CED-3 CLEAVAGE SITE IN BACULOVIRUS P35 PROTEIN Journal Article
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INTERMOLECULAR EXON LIGATION OF THE RIBOSOMAL-RNA PRECURSOR OF TETRAHYMENA - OLIGONUCLEOTIDES CAN FUNCTION AS 5' EXONS Journal Article
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Identification and characterization of a fibroblast growth factor (FGF) binding domain in the cysteine-rich FGF receptor Journal Article
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Identification and characterization of a novel high affinity metal-binding site in the hammerhead ribozyme Journal Article
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Identification of Subunit Binding Positions on a Model Fork and Displacements That Occur during Sequential Assembly of the Escherichia coli Primosome Journal Article
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Identification of a T4 gene required for bacteriophage mRNA processing. Journal Article
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Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods Journal Article
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Identification of a site critical for kinase regulation on the central processing unit (CPU) helix of the aspartate receptor Journal Article
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Identification of novel functional elements in the human genome Journal Article
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Identification of novel phosphorylation sites on Xenopus laevis aurora A and analysis of phosphopeptide enrichment by immobilized metal-affinity chromatography Journal Article
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Identification of the acidic residues in the active site of DNA polymerase III. Journal Article
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Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme. Journal Article
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Identification of the determinants for the specific recognition of single-strand telomeric DNA by Cdc13 Journal Article
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Identification of thermodynamically relevant interactions between EF-Tu and backbone elements of tRNA Journal Article
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Identifying ligand binding sites and poses using GPU-accelerated Hamiltonian replica exchange molecular dynamics Journal Article
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Identifying pattern-defined regulatory islands in mammalian genomes Journal Article
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Importin α-regulated nucleation of microtubules by TPX2 Journal Article
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Improved Free-Energy Landscape Quantification Illustrated with a Computationally Designed Protein-Ligand Interaction Journal Article
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In vitro evolution of the DNA binding sites of Escherichia coli methionine repressor, MetJ Journal Article
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In vitro selection of phosphorothiolated aptamers Journal Article
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Independent folding and ligand specificity of the C2 calcium-dependent lipid binding domain of cytosolic phospholipase A2 Journal Article
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Independent locations of kinase and 3'-phosphatase activities on T4 polynucleotide kinase. Journal Article
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Information, probability, and the abundance of the simplest RNA active sites Journal Article
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Inhibition of the hammerhead ribozyme cleavage reaction by site-specific binding of Tb(III) Journal Article
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Insights into the Dynamics of Specific Telomeric Single-Stranded DNA Recognition by Pot1pN Journal Article
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Insights into the Regulatory Landscape of the Lysine Riboswitch Journal Article
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Instant spectral assignment for advanced decision tree-driven mass spectrometry Journal Article
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Intact aminoacyl-tRNA is required to trigger GTP hydrolysis by elongation factor Tu on the ribosome Journal Article
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Interaction of Escherichia coli DbpA with 23S rRNA in different functional states of the enzyme. Journal Article
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Interaction of Escherichia coli host factor protein with Q beta ribonucleic acid. Journal Article
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Interaction of Escherichia coli host factor protein with oligoriboadenylates. Journal Article
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Interaction of Hyaluronan Binding Peptides with Glycosaminoglycans in Poly(ethylene glycol) Hydrogels Journal Article
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Interaction of R17 coat protein with its RNA binding site for translational repression. Journal Article
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Interactions between Hofmeister Anions and the Binding Pocket of a Protein Journal Article
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Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX Journal Article
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Intracellular calcium and myosin isoform transitions - Calcineurin and calcium-calmodulin kinase pathways regulate preferential activation of the iia myosin heavy chain promoter Journal Article
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Ion Binding Site Structure and the Role of Water in Alkaline Earth EDTA Complexes Journal Article
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Joining the two domains of a group I ribozyme to form the catalytic core Journal Article
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Kinetic analysis of site-specific photoaptamer-protein cross-linking Journal Article
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Kinetic analysis of the RNA-dependent adenosinetriphosphatase activity of DbpA, an Escherichia coli DEAD protein specific for 23S ribosomal RNA Journal Article
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Kinetic tuning of the EF-Hand calcium binding motif: The gateway residue independently adjusts (I) barrier height and (II) equilibrium Journal Article
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Ku can contribute to telomere lengthening in yeast at multiple positions in the telomerase RNP Journal Article
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LARGE-AMPLITUDE TWISTING MOTIONS OF AN INTERDOMAIN HINGE - A DISULFIDE TRAPPING STUDY OF THE GALACTOSE-GLUCOSE BINDING-PROTEIN Journal Article
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LEAD-CATALYZED CLEAVAGE OF YEAST TRANSFER RNAPHE MUTANTS Journal Article
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Lessons learned from comparing molecular dynamics engines on the SAMPL5 dataset Journal Article
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Libraries for genomic SELEX Journal Article
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Ligand-dependent folding of the three-way junction in the purine riboswitch Journal Article
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Light-induced structural changes in photosynthetic reaction center: Implications for mechanism of electron-proton transfer Journal Article
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Localization of the active site of the alpha subunit of the Escherichia coli DNA polymerase III holoenzyme. Journal Article
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Localization of the retinal protonated Schiff base counterion in rhodopsin. Journal Article
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Localizing the adhesive and signaling functions of plakoglobin Journal Article
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Location of the membrane-docking face on the Ca2+-activated C2 domain of cytosolic phospholipase A(2) Journal Article
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METAL-ION REQUIREMENTS FOR SEQUENCE-SPECIFIC ENDORIBONUCLEASE ACTIVITY OF THE TETRAHYMENA RIBOZYME Journal Article
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MINOR-GROOVE RECOGNITION OF THE CONSERVED G-CENTER-DOT-U PAIR AT THE TETRAHYMENA RIBOZYME REACTION SITE Journal Article
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MITOGEN-ACTIVATED PROTEIN (MAP) KINASE PHOSPHORYLATION OF MAP KINASE KINASE - DETERMINATION OF PHOSPHORYLATION SITES BY MASS-SPECTROMETRY AND SITE-DIRECTED MUTAGENESIS Journal Article
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MODELS FOR COPPER-CONTAINING PROTEINS - STRUCTURE AND PROPERTIES OF NOVEL 5-COORDINATE COPPER(I) COMPLEXES Journal Article
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MOVEMENT OF THE GUIDE SEQUENCE DURING RNA CATALYSIS BY A GROUP-I RIBOZYME Journal Article
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MUTANTS OF THE LAC PROMOTER WITH LARGE INSERTIONS AND DELETIONS BETWEEN THE CAP BINDING-SITE AND THE -35 REGION Journal Article
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MUTATIONS AT THE GUANOSINE-BINDING SITE OF THE TETRAHYMENA RIBOZYME ALSO AFFECT SITE-SPECIFIC HYDROLYSIS Journal Article
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MUTATIONS IN A NONCONSERVED SEQUENCE OF THE TETRAHYMENA RIBOZYME INCREASE ACTIVITY AND SPECIFICITY Journal Article
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Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA Journal Article
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Mechanism of Cdc25B Phosphatase with the Small Molecule Substrate p-Nitrophenyl Phosphate from QM/MM-MFEP Calculations Journal Article
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Mechanism of substrate recognition by Hsp70 chaperones Conference Proceeding
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Mechanisms by Which Human DNA Primase Chooses To Polymerize a Nucleoside Triphosphate Journal Article
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Microtubule-kinesin interface mutants reveal a site critical for communication Journal Article
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Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR Journal Article
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Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding Journal Article
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Modeling of Arylamide Helix Mimetics in the p53 Peptide Binding Site of hDM2 Suggests Parallel and Anti-Parallel Conformations Are Both Stable Journal Article
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Modified pyrimidines specifically bind the purine riboswitch Journal Article
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Modifying the specificity of an RNA backbone contact Journal Article
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Molecular interactions and metal binding in the theophylline-binding core of an RNA aptamer Journal Article
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Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection Journal Article
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Morphine-induced alterations in antibody levels: Receptor and immune mechanisms Journal Article
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Motor domain mutation traps kinesin as a microtubule rigor complex Journal Article
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Motor domains of kinesin and ncd interact with microtubule protofilaments with the same binding geometry Journal Article
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Mouse B2 SINE elements function as IFN-inducible enhancers Journal Article
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Multimodal Recognition of Diverse Peptides by the C-Terminal SH2 Domain of Phospholipase C-γ1 Protein Journal Article
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Mutagenesis and comparative sequence analysis of a base triple joining the two domains of group I ribozymes Journal Article
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Mutation in TERT separates processivity from anchor-site function Journal Article
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Mutation of the arginine finger in the active site of Escherichia coli DbpA abolishes ATPase and helicase activity and confers a dominant slow growth phenotype. Journal Article
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Mutational analysis of the purine riboswitch aptamer domain Journal Article
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Mutations in the GM1 Binding Site of Simian Virus 40 VP1 Alter Receptor Usage and Cell Tropism Journal Article
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Mutations in the Tetrahymena ribozyme internal guide sequence: Effects on docking of the P1 helix into the catalytic core and correlation with catalytic activity Journal Article
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Myocyte enhancer factor-2 and serum response factor binding elements regulate fast myosin heavy chain transcription in vivo Journal Article
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NATURE OF THE RIBOSOMAL MESSENGER-RNA TRACK - ANALYSIS OF RIBOSOME-BINDING SITES CONTAINING DIFFERENT SEQUENCES AND SECONDARY STRUCTURES Journal Article
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NFATc2 recruits cJun homodimers to an NFAT site to synergistically activate interleukin-2 transcription Journal Article
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NICOTINIC BINDING-SITES IN RAT AND MOUSE-BRAIN - COMPARISON OF ACETYLCHOLINE, NICOTINE, AND ALPHA-BUNGAROTOXIN Journal Article
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NMR Chemical Exchange as a Probe for Ligand-Binding Kinetics in a Theophylline-Binding RNA Aptamer Journal Article
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NMR Chemical Shift Mapping of SH2 Peptide Interactions Journal Article
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NOVEL ION SPECIFICITY OF A CARBOXYLATE CLUSTER MG(II) BINDING-SITE - STRONG CHARGE SELECTIVITY AND WEAK SIZE SELECTIVITY Journal Article
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NUCLEAR PROTEINS THAT BIND THE PREMESSENGER RNA 3' SPLICE-SITE SEQUENCE R(UUAG/G) AND THE HUMAN TELOMERIC DNA-SEQUENCE D(TTAGGG)N Journal Article
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Natural and artificial RNAs occupy the same restricted region of sequence space Journal Article
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Neural networks for determining protein specificity and multiple alignment of binding sites. Journal Article
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New Sensors for Quantitative Measurement of Mitochondrial Zn2+ Journal Article
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Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes Journal Article
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Novel Ligands for a Purine Riboswitch Discovered by RNA-Ligand Docking Journal Article
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Nucleosome and chromatin fiber dynamics Journal Article
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Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch Journal Article
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ONE BINDING-SITE DETERMINES SEQUENCE SPECIFICITY OF TETRAHYMENA PRE-RIBOSOMAL-RNA SELF-SPLICING, TRANSSPLICING, AND RNA ENZYME-ACTIVITY Journal Article
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OPEN CONFORMATION OF A SUBSTRATE-BINDING CLEFT - F-19 NMR-STUDIES OF CLEFT ANGLE IN THE D-GALACTOSE CHEMOSENSORY RECEPTOR Journal Article
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Oligonucleotide binding to the native and denatured conformers of yeast transfer RNA-3 Lea. Journal Article
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Opening of nucleic-acid double strands by helicases:: Active versus passive opening -: art. no. 011904 Journal Article
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Overview of the SAMPL5 host-guest challenge: Are we doing better? Journal Article
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PHOSPHORYLATED IMMUNORECEPTOR SIGNALING MOTIFS (ITAMS) EXHIBIT UNIQUE ABILITIES TO BIND AND ACTIVATE LYN AND SYK TYROSINE KINASES Journal Article
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PHOSPHORYLATION OF THE C-TERMINAL DOMAIN OF RNA-POLYMERASE-II BY THE EXTRACELLULAR-SIGNAL-REGULATED PROTEIN-KINASE ERK2 Journal Article
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PMR or the self-complementary oligoribonucleotide CpCpGpG. Journal Article
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PROTON NMR AND STRUCTURAL FEATURES OF A 24-NUCLEOTIDE RNA HAIRPIN Journal Article
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Paired heavy- and light-chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses Journal Article
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Paranemin and the organization of desmin filament networks Journal Article
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Phosphorylation regulates human OCT4 Journal Article
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Picking a nucleosome lock: Sequence- and structure-specific recognition of the nucleosome Journal Article
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Polymerization, three-dimensional structure and mechanical properties of Dictyostelium versus rabbit muscle actin filaments Journal Article
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Post-transcriptional regulation of satellite cell quiescence by TTP-mediated mRNA decay Journal Article
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Pot1, the putative telomere end-binding protein in fission yeast and humans Journal Article
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Preferential binding of the histone (H3-H4)2 tetramer by NAP1 is mediated by the amino-terminal histone tails Journal Article
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Primary cyclization in the polymerization of bis-GMA and TEGDMA: a modeling approach to understanding the cure of dental resins Journal Article
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Probing of metal-binding domains of RNA hairpin loops by laser-induced lanthanide(III) luminescence Journal Article
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Probing the Conformational Changes Associated with DNA Binding to PARP1 Journal Article
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Probing the binding of Tb(III) and Eu(III) to the hammerhead ribozyme using luminescence spectroscopy Journal Article
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Probing the mechanism of recognition of ssDNA by the Cdc13-DBD Journal Article
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Product Binding Varies Dramatically between Processive and Nonprocessive Cellulase Enzymes Journal Article
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Promoter scanning for transcription inhibition with DNA-binding polyamides Journal Article
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Proteasome Activation is Mediated via a Functional Switch of the Rpt6 C-terminal Tail Following Chaperone-dependent Assembly Journal Article
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Proteolytic inactivation of MAP-kinase-kinase by anthrax lethal factor Journal Article
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Purification and mass spectrometric identification of GA-binding protein (GABP) as the functional pituitary Ets factor binding to the basal transcription element of the prolactin promoter Journal Article
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QUANTITATING AND ENGINEERING THE ION SPECIFICITY OF AN EF-HAND-LIKE CA2+ BINDING-SITE Journal Article
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QUANTITATIVE-ANALYSIS OF RIBOSOME BINDING-SITES IN ESCHERICHIA-COLI Journal Article
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Quantitation of free energy profiles in RNA-ligand interactions by nucleotide analog interference mapping Journal Article
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Quantitative analysis of aspartate receptor signaling complex reveals that the homogeneous two-state model is inadequate: Development of a heterogeneous two-state model Journal Article
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RECOGNITION OF THE MESSENGER-RNA SELENOCYSTEINE INSERTION-SEQUENCE BY THE SPECIALIZED TRANSLATIONAL ELONGATION-FACTOR SELB Journal Article
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REGULATION BY HEPARAN-SULFATE IN FIBROBLAST GROWTH-FACTOR SIGNALING Book
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REGULATION OF THE MEC-3-GENE BY THE C-ELEGANS HOMEOPROTEINS UNC-86 AND MEC-3 Journal Article
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REPRESENTATION OF THE SECONDARY AND TERTIARY STRUCTURE OF GROUP-I INTRONS Journal Article
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RIBOSOME-BINDING SITES AND RNA-PROCESSING SITES IN THE TRANSCRIPT OF THE ESCHERICHIA-COLI UNC OPERON Journal Article
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RIBOZYME RECOGNITION OF RNA BY TERTIARY INTERACTIONS WITH SPECIFIC RIBOSE 2'-OH GROUPS Journal Article
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RIBOZYME REVEALED Journal Article
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RNA Binding Protein Vigilin Collaborates with miRNAs To Regulate Gene Expression for Caenorhabditis elegans Larval Development Journal Article
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RNA LIGANDS TO HUMAN NERVE GROWTH-FACTOR Journal Article
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RNA SUBSTRATE BINDING-SITE IN THE CATALYTIC CORE OF THE TETRAHYMENA RIBOZYME Journal Article
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RNA aptamers targeting the cell death inhibitor CED-9 induce cell killing in Caenorhabditis elegans Journal Article
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RNA aptamers to the adenosine moiety of S-adenosyl methionine: structural inferences from variations on a theme and the reproducibility of SELEX Journal Article
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RNA as a flexible scaffold for proteins: Yeast telomerase and beyond Journal Article
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RNA binding by the glucocorticoid receptor attenuates dexamethasone-induced gene activation Journal Article
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RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells Journal Article
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RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes Journal Article
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RNA recognition by the DNA end-binding Ku heterodimer Journal Article
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RNA replication by Q beta replicase: A working model Journal Article
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RNA-BINDING PROPERTIES OF THE COAT PROTEIN FROM BACTERIOPHAGE GA Journal Article
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RNA-BINDING SITE OF R17 COAT PROTEIN Journal Article
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RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome Journal Article
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Raf Kinase Inhibitory Protein Function Is Regulated via a Flexible Pocket and Novel Phosphorylation-Dependent Mechanism Journal Article
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Recapitulation of human betaB1-crystallin promoter activity in transgenic zebrafish. Journal Article
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Recognition of S-adenosylmethionine by riboswitches Journal Article
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Reconfiguration of the proteasome during chaperone-mediated assembly Journal Article
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Regulated interactions between dynamin and the actin-binding protein cortactin modulate cell shape Journal Article
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Regulation of TCF3 by Wnt-Dependent Phosphorylation during Vertebrate Axis Specification Journal Article
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Regulation of myostatin expression and myoblast differentiation by FoxO and SMAD transcription factors Journal Article
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Removal of Y-37 from tRNA phe yeast alters oligomer binding to two loops. Journal Article
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Reverse transcriptase motifs in the catalytic subunit of telomerase Journal Article
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Riboswitches: Fold and function Journal Article
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Role of a heterogeneous free state in the formation of a specific RNA-theophylline complex Journal Article
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Rosetta-Enabled Structural Prediction of Permissive Loop Insertion Sites in Proteins Journal Article
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SELECTION AND CHARACTERIZATION OF RNAS REPLICATED BY Q-BETA REPLICASE Journal Article
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SELECTION OF CIRCULARIZATION SITES IN A GROUP-1 IVS RNA REQUIRES MULTIPLE ALIGNMENTS OF AN INTERNAL TEMPLATE-LIKE SEQUENCE Journal Article
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SELECTION OF HIGH-AFFINITY RNA LIGANDS TO THE BACTERIOPHAGE-R17 COAT PROTEIN Journal Article
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SEQUENCE-SPECIFIC H-1-NMR ASSIGNMENTS, SECONDARY STRUCTURE, AND LOCATION OF THE CALCIUM-BINDING SITE IN THE 1ST EPIDERMAL GROWTH-FACTOR LIKE DOMAIN OF BLOOD-COAGULATION FACTOR-IX Journal Article
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SITEHOUND-web: a server for ligand binding site identification in protein structures Journal Article
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SPECIFIC RNA-BINDING BY Q-BETA COAT PROTEIN Journal Article
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STUDIES ON GENE CONTROL REGIONS .3. BINDING OF SYNTHETIC AND MODIFIED SYNTHETIC LAC OPERATOR DNAS TO LACTOSE REPRESSOR Journal Article
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STUDIES ON GENE CONTROL REGIONS .7. EFFECT OF 5-BROMOURACIL-SUBSTITUTED LAC OPERATORS ON LAC OPERATOR LAC REPRESSOR INTERACTION Journal Article
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STUDIES ON GENE-CONTROL REGIONS .15. INTERACTION OF AD2+D2 PROTEIN AND SIMIAN VIRUS-40 LARGE T-ANTIGEN WITH THE LARGE TUMOR-ANTIGEN BINDING SITE-I Journal Article
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STUDIES ON GENE-CONTROL REGIONS .20. BINDING-STUDIES OF SV40 T-ANTIGEN TO SV40 BINDING SITE-II Journal Article
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SULFHYDRYL MODIFICATION OF 2 NICOTINIC BINDING-SITES IN MOUSE-BRAIN Journal Article
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Schizosaccharomyces pombe Protection of Telomeres 1 Utilizes Alternate Binding Modes To Accommodate Different Telomeric Sequences Journal Article
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Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF). Journal Article
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Selecting apt RNAs for NMR Journal Article
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Selection and Characterization of a DNA Aptamer That Can Discriminate between cJun/cJun and cJun/cFos Journal Article
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Self-induced docking site of a deeply embedded peripheral membrane protein Journal Article
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Self-splicing of group I introns. Journal Article
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Sequence-dependent nanometer-scale conformational dynamics of individual RecBCD-DNA complexes Journal Article
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Sequence-dependent pausing of single lambda exonuclease molecules Journal Article
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Sequence-specific and 3 '-end selective single-strand DNA binding by the Oxytricha nova telomere end binding protein alpha subunit Journal Article
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Sequence-specific recognition of DNA in the nucleosome by pyrrole-imidazole polyamides Journal Article
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Sequestering of Eu(III) by a GAAA RNA tetraloop Journal Article
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Sex lethal and U2 small nuclear ribonucleoprotein auxiliary factor (U2AF(65)) recognize polypyrimidine tracts using multiple modes of binding Journal Article
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Single molecule studies reveal that p53 tetramers dynamically bind response elements containing one or two half sites Journal Article
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Single-stranded RNA recognition by the bacteriophage T4 translational repressor, RegA Journal Article
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Single-stranded telomere-binding protein employs a dual rheostat for binding affinity and specificity that drives function Journal Article
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Site-Specific Patterning of Highly Ordered Nanocrystal Super lattices through Biomolecular Surface Confinement Journal Article
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Site-directed mutagenesis reveals the thermodynamic requirements for single-stranded DNA recognition by the telomere-binding protein Cdc13 Journal Article
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Slow Inhibition and Conformation Selective Properties of Extracellular Signal-Regulated Kinase 1 and 2 Inhibitors Journal Article
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Soaking Hexammine Cations into RNA Crystals to Obtain Derivatives for Phasing Diffraction Data Journal Article
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Solution structure of RNase P RNA Journal Article
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Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 Å resolution Journal Article
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Spen links RNA-mediated endogenous retrovirus silencing and X chromosome inactivation Journal Article
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Stability of Nucleosomes Containing Homogenously Ubiquitylated H2A and H2B Prepared Using Semisynthesis Journal Article
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Stability of p53 Homologs Journal Article
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Stability of ribonucleic acid double-stranded helices. Journal Article
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Stabilization of the SARS-CoV-2 receptor binding domain by protein core redesign and deep mutational scanning Journal Article
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Steric interference modification of the hammerhead ribozyme Journal Article
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Structural Basis of Selective Ubiquitination of TRF1 by SCFFbx4 Journal Article
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Structural Insights into Transcriptional Repression by Noncoding RNAs That Bind to Human Pol II Journal Article
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Structural analysis of the ZEN-4/CeMKLP1 motor domain and its interaction with microtubules Journal Article
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Structural and energetic analysis of metal ions essential to SRP signal recognition domain assembly Journal Article
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Structural basis for the interaction of the fluorescence probe 8-anilino-1-naphthalene sulfonate (ANS) with the antibiotic target MurA Journal Article
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Structural basis of the enhanced stability of a mutant ribozyme domain and a detailed view of RNA-solvent interactions Journal Article
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Structural characterization of histone H2A variants. Journal Article
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Structural determinants for generating centromeric chromatin Journal Article
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Structural distortion of p53 by the mutation R249S and its rescue by a designed peptide: implications for "mutant conformation". Journal Article
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Structural mechanism of muscle nicotinic receptor desensitization and block by curare Journal Article
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Structural studies of catalytic RNAs by heteronuclear multi-dimensional NMR. Journal Article
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Structural studies of the purine and SAM binding riboswitches Journal Article
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Structural variation induced by different nucleotides at the cleavage site of the hammerhead ribozyme Journal Article
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Structure Analysis of the Major Capsid Proteins of Human Polyomaviruses 6 and 7 Reveals an Obstructed Sialic Acid Binding Site Journal Article
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Structure and Function of Steroid Receptor RNA Activator Protein, the Proposed Partner of SRA Noncoding RNA Journal Article
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Structure and dynamics of nucleosomal DNA Journal Article
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Structure and mechanism of ArnA: Conformational change implies ordered dehydrogenase mechanism in key enzyme for polymyxin resistance Journal Article
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Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site. Journal Article
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Structure of Mediator of RhoA-Dependent Invasion (MRDI) Explains Its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion Journal Article
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Structure of a class II TrmH tRNA-modifying enzyme from Aquifex aeolicus Journal Article
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Structure of a fast kinesin: implications for ATPase mechanism and interactions with microtubules Journal Article
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Structure of p300 bound to MEF2 on DNA reveals a mechanism of enhanceosome assembly Journal Article
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Structure of the S-adenosylmethionine riboswitch regulatory mRNA element Journal Article
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Structure of the Tetrahymena ribozyme:: Base triple sandwich and metal ion at the active site Journal Article
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Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans Journal Article
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Structure of the Human cGAS-DNA Complex Reveals Enhanced Control of Immune Surveillance Journal Article
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Structure of the Native Muscle-type Nicotinic Receptor and Inhibition by Snake Venom Toxins Journal Article
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Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch Journal Article
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Structures of Merkel Cell Polyomavirus VP1 Complexes Define a Sialic Acid Binding Site Required for Infection Journal Article
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Switching human telomerase on and off with hPOT1 protein in vitro Journal Article
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TELOMERIC PROTEIN-DNA POINT CONTACTS IDENTIFIED BY PHOTO-CROSS-LINKING USING 5-BROMODEOXYURIDINE Journal Article
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TEMPLATE RECOGNITION BY AN RNA-DEPENDENT RNA-POLYMERASE - IDENTIFICATION AND CHARACTERIZATION OF 2 RNA-BINDING SITES ON Q-BETA REPLICASE Journal Article
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TERTIARY INTERACTIONS WITH THE INTERNAL GUIDE SEQUENCE MEDIATE DOCKING OF THE P1 HELIX INTO THE CATALYTIC CORE OF THE TETRAHYMENA RIBOZYME Journal Article
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TERTIARY STRUCTURE AROUND THE GUANOSINE-BINDING SITE OF THE TETRAHYMENA RIBOZYME Journal Article
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THE EFFECT OF BASE MISMATCHES IN THE SUBSTRATE RECOGNITION HELICES OF HAMMERHEAD RIBOZYMES ON BINDING AND CATALYSIS Journal Article
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THE IMPORTANCE OF BEING RIBOSE AT THE CLEAVAGE SITE IN THE TETRAHYMENA RIBOZYME REACTION Journal Article
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THE NATURE OF THE PRIMARY PHOTOCHEMICAL EVENTS IN RHODOPSIN AND ISORHODOPSIN Journal Article
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THE TETRAHYMENA INTERVENING SEQUENCE RIBONUCLEIC-ACID ENZYME IS A PHOSPHOTRANSFERASE AND AN ACID-PHOSPHATASE Journal Article
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THE TETRAHYMENA RIBOZYME ACTS LIKE AN RNA RESTRICTION ENDONUCLEASE Journal Article
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TRANSLATION INITIATION IN ESCHERICHIA-COLI - SEQUENCES WITHIN THE RIBOSOME-BINDING SITE Journal Article
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TRANSLATIONAL INITIATION IN PROKARYOTES Journal Article
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TRANSLATIONAL REPRESSION - BIOLOGICAL-ACTIVITY OF PLASMID-ENCODED BACTERIOPHAGE T4-REGA PROTEIN Journal Article
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TRANSLOCATION OF AN RNA DUPLEX ON A RIBOZYME Journal Article
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Targeting of Polycomb Repressive Complex 2 to RNA by Short Repeats of Consecutive Guanines Journal Article
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Tau binds and organizes Escherichia coli replication proteins through distinct domains. Domain III, shared by gamma and tau, binds delta delta ' and chi psi. Journal Article
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Telomerase RNA bound by protein motifs specific to telomerase reverse transcriptase Journal Article
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Telomerase catalytic subunit homologs from fission yeast and human Journal Article
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Templated Assembly of DNA Origami Gold Nanoparticle Arrays on Lithographically Patterned Surfaces Journal Article
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The 3.2 Å Resolution Structure of a Receptor:CheA:CheW Signaling Complex Defines Overlapping Binding Sites and Key Residue Interactions within Bacterial Chemosensory Arrays Journal Article
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The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA Journal Article
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The Euplotes La motif protein p43 has properties of a telomerase-specific subunit Journal Article
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The trans-SNARE-regulating function of Munc18-1 is essential to synaptic exocytosis Journal Article
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The C-terminal region of human NFATc2 binds dun to synergistically activate interleukin-2 transcription Journal Article
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The Discovery of furo[2,3-c]pyridine-based indanone oximes as potent and selective B-Raf inhibitors Journal Article
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The FGF receptor-1 tyrosine kinase domain regulates myogenesis but is not sufficient to stimulate proliferation Journal Article
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The GRP1 PH Domain, Like the AKT1 PH Domain, Possesses a Sentry Glutamate Residue Essential for Specific Targeting to Plasma Membrane PI(3,4,5)P3 Journal Article
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The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling Journal Article
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The Structure and Specificity of the Type III Secretion System Effector NleC Suggest a DNA Mimicry Mechanism of Substrate Recognition Journal Article
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The Structure of a BamA-BamD Fusion Illuminates the Architecture of the β-Barrel Assembly Machine Core Journal Article
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The Structure of a Tetrahydrofolate-Sensing Riboswitch Reveals Two Ligand Binding Sites in a Single Aptamer Journal Article
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The Superfast Human Extraocular Myosin Is Kinetically Distinct from the Fast Skeletal IIa, IIb, and IId Isoforms Journal Article
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The adjacent dnaZ and dnaX genes of Escherichia coli are contained within one continuous open reading frame. Journal Article
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The affinity of elongation factor Tu for an aminoacyl-tRNA is modulated by the esterified amino acid. Journal Article
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The anchor site of telomerase from Euplotes aediculatus revealed by photo-cross-linking to single- and double-stranded DNA primers Journal Article
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The carboxy-terminal domain of the DExD/H protein YxiN is sufficient to confer specificity for 23 S rRNA Journal Article
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The glucocorticoid receptor DNA-binding domain recognizes RNA hairpin structures with high affinity Journal Article
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The kinetic cycle of cardiac troponin C: Calcium binding and dissociation at site II trigger slow conformational rearrangements Journal Article
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The mathematics of SELEX against complex targets Journal Article
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The tRNA specificity of Thermus thermophilus EF-Tu Journal Article
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The transmembrane molecule kekkon 1 acts in a feedback loop to negatively regulate the activity of the Drosophila EGF receptor during oogenesis Journal Article
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Themes in ssDNA recognition by telomere-end protection proteins Journal Article
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Thermal-activated protein mobility and its correlation with catalysis in thermophilic alcohol dehydrogenase Journal Article
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Toehold-Mediated Displacement of an Adenosine-Binding Aptamer from a DNA Duplex by its Ligand Journal Article
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Toward the Rational Design of p53-Stabilizing Drugs: Probing the Surface of the Oncogenic Y220C Mutant Journal Article
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Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH: a model for promoter clearance. Journal Article
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Transcription factors ERα and Sox2 have differing multiphasic DNA- and RNA-binding mechanisms. Journal Article
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Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape Journal Article
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Transmembrane Peptides Used to Investigate the Homo-Oligomeric Interface and Binding Hotspot of Latent Membrane Protein 1 Journal Article
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Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions Journal Article
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Triple-helix structure in telomerase RNA contributes to catalysis Journal Article
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Tuning the equilibrium ion affinity and selectivity of the EF-hand calcium binding motif: Substitutions at the gateway position Journal Article
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USING CIRCULAR PERMUTATION ANALYSIS TO REDEFINE THE R17 COAT PROTEIN-BINDING SITE Journal Article
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Ubiquitin-dependent switch during assembly of the proteasomal ATPases mediated by Not4 ubiquitin ligase Journal Article
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Uncompetitive substrate inhibition and noncompetitive inhibition by 5-n-undecyl-6-hydroxy-4,7-dioxobenzothiazole (UHDBT) and 2-n-Nonyl-4-hydroxyquinoline-N-oxide (NQNO) is observed for the cytochrome bo(3) complex: Implications for a Q(H-2)-loop proton translocation mechanism Journal Article
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Understanding the sequence specificity of tRNA binding to elongation factor Tu using tRNA mutagenesis. Journal Article
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Use of fluorescence resonance energy transfer to monitor Ca(2+)-triggered membrane docking of C2 domains. Journal Article
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Using phosphorothioate-substituted RNA to investigate the thermodynamic role of phosphates in a sequence specific RNA-protein complex Journal Article
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VIMENTINS TAIL INTERACTS WITH ACTIN-CONTAINING STRUCTURES IN-VIVO Journal Article
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Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase Journal Article
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Yeast telomerase RNA: A flexible scaffold for protein subunits Journal Article
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dGTP-dependent processivity and possible template switching of Euplotes telomerase Journal Article
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mRNA display:: Diversity matters during in vitro selection Journal Article
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mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts Journal Article
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p53 regulates enhancer accessibility and activity in response to DNA damage Journal Article
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tau binds and organizes Escherichia coli replication proteins through distinct domains. Domain IV, located within the unique C terminus of tau, binds the replication fork, helicase, DnaB. Journal Article
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tau binds and organizes Escherichia coli replication through distinct domains. Partial proteolysis of terminally tagged tau to determine candidate domains and to assign domain V as the alpha binding domain. Journal Article
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